Ligand validation:4U8P

UDP: URIDINE-5'-DIPHOSPHATE

UDP is a Ligand Of Interest in 4U8P designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
4U8P_UDP_C_602	47%	16%	0.144	0.883	1.95	1.72	8	7	0	0	100%	0.83
4U8P_UDP_B_602	42%	16%	0.165	0.883	1.92	1.77	8	7	0	0	100%	0.79
4U8P_UDP_B_603	41%	18%	0.14	0.914	1.77	1.77	5	4	0	0	68%	0.5372
4U8P_UDP_D_602	41%	15%	0.161	0.877	2	1.75	8	6	0	0	100%	0.81
4U8P_UDP_A_603	32%	17%	0.154	0.885	1.82	1.78	5	4	0	0	68%	0.5576
4U8P_UDP_A_602	27%	16%	0.214	0.861	1.95	1.71	8	6	0	0	100%	0.79
4U8P_UDP_C_603	8%	9%	0.271	0.817	2.39	2.05	8	5	0	0	60%	0.516
3UTG_UDP_A_515	88%	20%	0.113	0.988	1.86	1.56	8	7	0	0	100%	0.9
4U8N_UDP_B_602	84%	19%	0.124	0.985	1.85	1.59	8	9	0	0	100%	1
3UKL_UDP_E_800	76%	37%	0.124	0.962	0.94	1.53	1	6	1	0	100%	1
4U8O_UDP_B_602	75%	16%	0.126	0.96	2.05	1.63	9	8	2	0	100%	0.91
4WX1_UDP_B_602	67%	18%	0.139	0.948	1.99	1.59	9	7	1	0	100%	0.85
8X3Q_UDP_C_401	100%	3%	0.015	0.998	3.32	2.69	13	13	0	0	100%	1
8X3U_UDP_B_401	100%	3%	0.012	0.999	3.31	2.68	13	13	2	0	100%	1
8VH8_UDP_C_704	100%	62%	0.032	0.995	0.55	0.9	-	1	0	0	100%	1
4GYW_UDP_C_1101	100%	37%	0.037	0.988	1.03	1.45	2	4	0	0	100%	1
2IV7_UDP_A_1372	100%	40%	0.035	0.984	0.85	1.49	-	4	0	0	100%	1

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.