5DBE | pdb_00005dbe


0JO: 2-{[(E)-{3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene]amino}prop-2-enoic acid

0JO is a Ligand Of Interest in 5DBE designated by the RCSB
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Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter5DBE_0JO_X_404Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter5DBE_0JO_X_404Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter5DBE_0JO_X_404Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with same target (top 5)
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
5DBE_0JO_X_404 65% 4% 0.155 0.9563.79 2.04 13 580100%1
5DBH_0JO_X_402 90% 4% 0.088 0.9693.88 2.02 11 420100%1
3B1E_0JO_D_401 100% 19% 0.042 0.9821.98 1.47 6 460100%1
7KYT_0JO_B_403 98% 51% 0.066 0.9871.29 0.61 2 -00100%1
4IY7_0JO_A_405 97% 10% 0.069 0.9842.66 1.62 6 430100%1
7KWV_0JO_B_501 97% 48% 0.077 0.991.16 0.86 2 100100%1
4HPX_0JO_B_404 96% 16% 0.075 0.9822.34 1.39 4 200100%1