D1D: (4S,5S)-1,2-DITHIANE-4,5-DIOL
D1D is a Ligand Of Interest in 5GIF designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
5GIF_D1D_A_301 | 87% | 28% | 0.093 | 0.966 | 1.76 | 1.16 | 2 | 1 | 1 | 0 | 100% | 1 |
5GIF_D1D_A_302 | 18% | 38% | 0.277 | 0.866 | 1.65 | 0.8 | 2 | - | 2 | 0 | 100% | 1 |
5GI8_D1D_A_303 | 95% | 47% | 0.073 | 0.978 | 1.27 | 0.79 | 1 | - | 0 | 0 | 100% | 1 |
5GI9_D1D_A_304 | 58% | 39% | 0.155 | 0.935 | 1.62 | 0.77 | 2 | - | 0 | 0 | 100% | 1 |
5GIG_D1D_A_303 | 54% | 39% | 0.166 | 0.932 | 1.55 | 0.87 | 2 | - | 1 | 0 | 100% | 1 |
2HEI_D1D_B_302 | 96% | 22% | 0.063 | 0.971 | 1.79 | 1.45 | 1 | 1 | 0 | 2 | 100% | 1 |
3MNG_D1D_A_201 | 96% | 9% | 0.069 | 0.977 | 0.63 | 3.76 | - | 2 | 0 | 0 | 100% | 1 |
5PA3_D1D_A_304 | 94% | 29% | 0.071 | 0.972 | 1.13 | 1.7 | - | 2 | 0 | 0 | 100% | 1 |
5P90_D1D_A_305 | 94% | 27% | 0.069 | 0.969 | 0.67 | 2.22 | - | 2 | 3 | 0 | 100% | 0.5 |
6A6U_D1D_A_504 | 88% | 71% | 0.088 | 0.963 | 0.3 | 0.8 | - | - | 0 | 0 | 100% | 1 |