5JDN | pdb_00005jdn


OLC: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate

OLC is a Ligand Of Interest in 5JDN designated by the RCSB


Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter5JDN_OLC_A_404Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter5JDN_OLC_A_404Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter5JDN_OLC_A_404Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with same target (top 5)
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
5JDN_OLC_A_404 8% 47% 0.27 0.7491 1.06 1 280100%1
5JDN_OLC_A_405 1% 50% 0.39 0.610.75 1.17 - 11036%1
5HYA_OLC_A_423 33% 45% 0.191 0.8691.33 0.81 2 140100%1
3V5U_OLC_A_724 26% 47% 0.211 0.8521.01 1.02 1 120100%1
5HXC_OLC_A_420 17% 91% 0.191 0.9050.34 0.25 - -0024%1
5JDF_OLC_A_403 13% 56% 0.213 0.8720.64 1.04 - 10036%1
5HXH_OLC_B_406 9% 51% 0.278 0.8051.01 0.9 1 10080%1
9F9J_OLC_A_307 100% 42% 0.034 0.9811.05 1.18 1 200100%1
9I6I_OLC_B_312 74% 47% 0.098 0.9640.84 1.18 - 10080%1
9I6H_OLC_B_311 73% 48% 0.097 0.9580.84 1.17 - 13080%1
7YXA_OLC_A_2505 70% 60% 0.127 0.9430.67 0.84 - -30100%1
9F9D_OLC_A_308 67% 42% 0.081 0.8870.96 1.29 1 300100%1