Ligand validation:5L8R

CLA: CHLOROPHYLL A

CLA is a Ligand Of Interest in 5L8R designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
5L8R_CLA_A_839	92%	25%	0.078	0.969	1.32	1.73	6	11	5	1	100%	1
5L8R_CLA_A_841	91%	24%	0.085	0.971	1.35	1.76	7	12	8	1	100%	1
5L8R_CLA_B_814	88%	23%	0.097	0.971	1.33	1.82	8	13	4	1	100%	1
5L8R_CLA_A_802	87%	23%	0.094	0.965	1.29	1.86	7	18	9	1	100%	1
5L8R_CLA_J_1101	86%	21%	0.09	0.96	1.31	1.96	6	18	11	1	100%	1
5L8R_CLA_B_819	86%	23%	0.102	0.971	1.3	1.86	6	14	5	1	100%	1
5L8R_CLA_B_836	84%	24%	0.09	0.953	1.32	1.76	6	12	3	1	100%	1
5L8R_CLA_F_302	84%	23%	0.098	0.961	1.34	1.84	7	15	3	1	100%	1
5L8R_CLA_B_824	84%	21%	0.102	0.964	1.32	1.97	7	14	7	1	100%	1
5L8R_CLA_B_838	84%	23%	0.096	0.957	1.34	1.81	7	13	9	1	100%	1
5L8R_CLA_A_830	83%	23%	0.098	0.958	1.31	1.85	7	15	6	1	100%	1
5L8R_CLA_A_806	83%	23%	0.099	0.959	1.31	1.83	6	13	2	1	100%	1
5L8R_CLA_A_808	83%	22%	0.1	0.959	1.3	1.9	5	12	3	1	100%	1
5L8R_CLA_A_803	83%	23%	0.099	0.957	1.31	1.87	7	13	6	1	100%	1
5L8R_CLA_B_832	83%	20%	0.084	0.961	1.38	1.98	6	15	6	1	89%	0.8923
5L8R_CLA_A_840	83%	23%	0.101	0.958	1.28	1.85	6	14	2	1	100%	1
5L8R_CLA_2_507	82%	22%	0.105	0.961	1.32	1.92	5	14	2	1	100%	1
5L8R_CLA_B_809	82%	24%	0.106	0.962	1.34	1.75	8	12	5	1	100%	1
5L8R_CLA_B_826	81%	23%	0.105	0.958	1.34	1.82	8	13	4	1	100%	1
5L8R_CLA_2_506	81%	22%	0.106	0.957	1.33	1.92	8	14	4	1	100%	1
5L8R_CLA_B_804	80%	21%	0.103	0.952	1.34	1.94	6	15	2	1	100%	1
5L8R_CLA_A_809	80%	23%	0.106	0.954	1.3	1.87	6	15	8	1	100%	1
5L8R_CLA_B_807	79%	23%	0.105	0.952	1.32	1.82	6	12	2	1	100%	1
5L8R_CLA_A_825	79%	21%	0.112	0.959	1.36	1.92	8	17	7	1	100%	1
5L8R_CLA_B_806	79%	24%	0.115	0.961	1.32	1.8	6	12	3	1	100%	1
5L8R_CLA_A_837	79%	24%	0.107	0.952	1.34	1.77	8	12	4	1	100%	1
5L8R_CLA_A_811	78%	23%	0.099	0.942	1.32	1.85	7	13	9	1	100%	1
5L8R_CLA_B_810	78%	23%	0.108	0.949	1.31	1.85	6	13	3	1	100%	1
5L8R_CLA_A_855	78%	23%	0.108	0.949	1.3	1.84	8	13	8	1	100%	1
5L8R_CLA_B_823	77%	20%	0.09	0.958	1.45	1.93	8	10	7	1	85%	0.8462
5L8R_CLA_4_307	77%	21%	0.101	0.955	1.36	1.96	6	16	8	1	92%	0.9231
5L8R_CLA_A_833	77%	23%	0.109	0.948	1.32	1.83	7	15	6	1	100%	1
5L8R_CLA_B_803	77%	24%	0.11	0.949	1.3	1.78	5	10	4	1	100%	1
5L8R_CLA_A_805	77%	23%	0.112	0.951	1.34	1.8	7	10	7	1	100%	1
5L8R_CLA_A_854	76%	23%	0.115	0.952	1.29	1.88	6	16	8	1	100%	1
5L8R_CLA_B_812	76%	23%	0.099	0.949	1.4	1.78	7	11	6	1	92%	0.9231
5L8R_CLA_B_820	76%	25%	0.12	0.955	1.35	1.7	8	12	5	1	100%	1
5L8R_CLA_B_830	75%	23%	0.106	0.94	1.32	1.82	9	14	9	0	100%	1
5L8R_CLA_B_811	75%	23%	0.112	0.946	1.36	1.82	8	13	2	1	100%	1
5L8R_CLA_4_306	75%	23%	0.116	0.95	1.34	1.83	7	15	1	1	100%	1
5L8R_CLA_A_828	74%	22%	0.116	0.947	1.31	1.9	7	11	6	1	100%	1
5L8R_CLA_B_834	74%	21%	0.09	0.948	1.46	1.87	7	13	5	1	85%	0.8462
5L8R_CLA_B_818	74%	24%	0.123	0.954	1.35	1.76	9	14	5	1	100%	1
5L8R_CLA_A_819	74%	24%	0.126	0.957	1.31	1.81	6	14	6	1	100%	1
5L8R_CLA_B_828	74%	24%	0.121	0.95	1.29	1.82	7	11	2	1	100%	1
5L8R_CLA_A_807	73%	21%	0.097	0.938	1.4	1.89	6	13	4	1	92%	0.9231
5L8R_CLA_B_833	73%	22%	0.1	0.941	1.36	1.86	7	12	6	1	92%	0.9231
5L8R_CLA_L_304	73%	21%	0.105	0.946	1.35	1.94	5	13	2	1	92%	0.9231
5L8R_CLA_B_825	73%	22%	0.113	0.94	1.3	1.93	6	17	7	1	100%	1
5L8R_CLA_A_829	73%	24%	0.122	0.949	1.3	1.82	8	13	5	1	100%	1
5L8R_CLA_G_202	73%	19%	0.093	0.947	1.46	1.95	8	14	3	0	85%	0.8462
5L8R_CLA_A_834	73%	24%	0.112	0.938	1.31	1.8	6	12	6	0	100%	1
5L8R_CLA_4_312	73%	18%	0.098	0.965	1.52	2.03	7	15	4	0	77%	0.7692
5L8R_CLA_A_824	72%	24%	0.125	0.95	1.33	1.75	7	12	10	1	100%	1
5L8R_CLA_4_308	72%	20%	0.11	0.947	1.35	2.04	5	15	3	0	92%	0.9231
5L8R_CLA_B_829	72%	23%	0.124	0.947	1.35	1.8	7	14	6	1	100%	1
5L8R_CLA_B_813	71%	16%	0.084	0.958	1.57	2.08	6	14	1	1	71%	0.7077
5L8R_CLA_A_821	71%	25%	0.118	0.94	1.31	1.73	5	15	8	1	100%	1
5L8R_CLA_2_504	71%	20%	0.107	0.942	1.36	2	6	14	6	1	92%	0.9231
5L8R_CLA_B_840	70%	24%	0.11	0.928	1.32	1.81	6	12	13	0	100%	1
5L8R_CLA_B_837	70%	19%	0.097	0.956	1.49	1.98	8	14	5	1	77%	0.7692
5L8R_CLA_B_815	70%	23%	0.126	0.944	1.31	1.87	5	12	4	1	100%	1
5L8R_CLA_4_315	70%	23%	0.127	0.945	1.33	1.83	7	14	3	1	100%	1
5L8R_CLA_2_508	70%	19%	0.1	0.945	1.39	2.06	6	16	4	1	85%	0.8462
5L8R_CLA_L_301	69%	19%	0.109	0.952	1.45	1.99	7	14	2	1	85%	0.8462
5L8R_CLA_A_822	69%	21%	0.109	0.936	1.41	1.86	7	13	2	1	92%	0.9231
5L8R_CLA_A_826	68%	20%	0.112	0.952	1.44	1.95	7	13	4	1	85%	0.8462
5L8R_CLA_1_507	68%	23%	0.125	0.937	1.32	1.87	7	13	6	1	100%	1
5L8R_CLA_A_827	68%	23%	0.126	0.938	1.33	1.84	7	14	4	1	100%	1
5L8R_CLA_B_835	68%	21%	0.112	0.951	1.44	1.88	7	11	5	0	85%	0.8462
5L8R_CLA_A_832	68%	24%	0.133	0.944	1.34	1.77	6	11	6	1	100%	1
5L8R_CLA_1_506	67%	19%	0.117	0.954	1.43	1.99	8	12	0	1	85%	0.8462
5L8R_CLA_B_839	67%	24%	0.126	0.935	1.34	1.79	6	12	3	1	100%	1
5L8R_CLA_1_508	67%	22%	0.129	0.938	1.33	1.87	8	15	8	0	100%	1
5L8R_CLA_4_304	67%	18%	0.119	0.941	1.38	2.11	6	18	5	1	92%	0.9231
5L8R_CLA_A_804	66%	23%	0.126	0.931	1.31	1.84	8	11	4	1	100%	1
5L8R_CLA_A_814	66%	22%	0.126	0.93	1.33	1.89	8	16	2	1	100%	1
5L8R_CLA_J_1102	66%	16%	0.088	0.946	1.54	2.1	6	11	4	1	69%	0.6923
5L8R_CLA_2_505	66%	18%	0.108	0.947	1.5	2.02	9	13	3	1	80%	0.8
5L8R_CLA_B_817	65%	21%	0.123	0.938	1.4	1.93	8	13	2	1	92%	0.9231
5L8R_CLA_3_308	65%	22%	0.135	0.936	1.32	1.9	6	16	9	1	100%	1
5L8R_CLA_A_810	64%	17%	0.108	0.949	1.52	2.07	8	11	5	1	77%	0.7692
5L8R_CLA_B_805	64%	24%	0.124	0.923	1.33	1.78	7	11	4	1	100%	1
5L8R_CLA_B_822	64%	23%	0.136	0.934	1.35	1.81	8	13	4	1	100%	1
5L8R_CLA_2_510	63%	21%	0.123	0.933	1.38	1.9	7	14	3	1	92%	0.9231
5L8R_CLA_A_818	63%	20%	0.118	0.938	1.44	1.92	9	13	7	1	86%	0.8615
5L8R_CLA_4_311	62%	17%	0.101	0.945	1.57	2.03	6	10	2	1	71%	0.7077
5L8R_CLA_B_827	62%	23%	0.148	0.939	1.3	1.86	8	13	3	1	100%	1
5L8R_CLA_A_813	61%	23%	0.141	0.931	1.29	1.88	7	14	6	1	100%	1
5L8R_CLA_4_318	61%	23%	0.143	0.933	1.29	1.86	6	13	7	1	100%	1
5L8R_CLA_4_310	61%	22%	0.128	0.931	1.4	1.85	9	11	6	1	92%	0.9231
5L8R_CLA_B_821	61%	17%	0.103	0.944	1.59	2.02	7	11	0	1	71%	0.7077
5L8R_CLA_A_812	61%	20%	0.128	0.944	1.46	1.94	7	14	3	0	85%	0.8462
5L8R_CLA_A_838	59%	24%	0.138	0.921	1.34	1.79	7	13	1	1	100%	1
5L8R_CLA_2_514	59%	20%	0.121	0.931	1.44	1.96	7	12	2	1	85%	0.8462
5L8R_CLA_A_831	59%	23%	0.13	0.911	1.33	1.83	5	15	4	1	100%	1
5L8R_CLA_B_808	59%	24%	0.132	0.912	1.35	1.75	7	12	4	1	100%	1
5L8R_CLA_3_316	58%	16%	0.097	0.927	1.58	2.07	9	13	5	1	71%	0.7077
5L8R_CLA_2_509	58%	18%	0.111	0.93	1.49	1.99	5	13	1	1	77%	0.7692
5L8R_CLA_A_836	58%	18%	0.118	0.934	1.49	2.05	6	15	5	0	78%	0.7846
5L8R_CLA_B_816	57%	19%	0.12	0.923	1.45	1.96	8	11	3	1	85%	0.8462
5L8R_CLA_F_303	57%	24%	0.126	0.901	1.32	1.8	6	12	6	0	100%	1
5L8R_CLA_3_309	57%	19%	0.132	0.934	1.48	1.98	8	15	3	0	85%	0.8462
5L8R_CLA_A_815	56%	17%	0.114	0.942	1.61	1.99	8	13	1	1	69%	0.6923
5L8R_CLA_3_315	56%	17%	0.119	0.933	1.49	2.08	5	13	5	1	77%	0.7692
5L8R_CLA_A_820	56%	18%	0.129	0.943	1.53	2.01	8	12	1	1	77%	0.7692
5L8R_CLA_4_305	56%	16%	0.122	0.935	1.56	2.08	8	16	3	1	77%	0.7692
5L8R_CLA_3_307	55%	18%	0.13	0.926	1.45	2.05	7	16	5	1	85%	0.8462
5L8R_CLA_A_817	55%	25%	0.147	0.914	1.33	1.74	6	11	0	1	100%	1
5L8R_CLA_2_511	55%	17%	0.119	0.927	1.52	2.07	7	13	4	1	77%	0.7692
5L8R_CLA_A_823	55%	22%	0.123	0.903	1.41	1.83	8	13	3	1	92%	0.9231
5L8R_CLA_A_842	53%	21%	0.106	0.881	1.36	1.94	7	13	7	1	92%	0.9231
5L8R_CLA_G_201	53%	22%	0.135	0.897	1.34	1.88	7	15	5	1	100%	1
5L8R_CLA_3_317	52%	17%	0.123	0.933	1.6	1.97	8	11	4	1	71%	0.7077
5L8R_CLA_1_504	52%	22%	0.14	0.897	1.32	1.88	6	16	8	1	100%	1
5L8R_CLA_G_203	51%	17%	0.092	0.898	1.57	2.02	7	12	1	1	71%	0.7077
5L8R_CLA_1_505	50%	17%	0.113	0.916	1.58	2.02	8	11	1	0	71%	0.7077
5L8R_CLA_B_831	49%	22%	0.136	0.897	1.37	1.83	7	13	3	1	92%	0.9231
5L8R_CLA_3_305	49%	18%	0.111	0.885	1.46	2.07	8	14	18	1	85%	0.8462
5L8R_CLA_1_516	46%	21%	0.129	0.878	1.4	1.89	7	14	5	1	92%	0.9231
5L8R_CLA_A_835	44%	20%	0.133	0.889	1.47	1.93	8	14	3	1	85%	0.8462
5L8R_CLA_4_309	44%	17%	0.134	0.903	1.48	2.11	7	13	10	1	77%	0.7692
5L8R_CLA_1_515	43%	18%	0.133	0.911	1.62	1.88	9	10	8	1	69%	0.6923
5L8R_CLA_3_313	42%	22%	0.146	0.878	1.37	1.89	6	14	2	1	92%	0.9231
5L8R_CLA_1_509	40%	18%	0.13	0.881	1.5	2.05	7	16	3	1	77%	0.7692
5L8R_CLA_G_204	40%	23%	0.156	0.865	1.31	1.86	9	13	10	1	100%	1
5L8R_CLA_A_816	39%	17%	0.125	0.881	1.58	2.04	7	11	1	1	71%	0.7077
5L8R_CLA_L_305	38%	18%	0.129	0.872	1.54	1.98	9	13	2	1	77%	0.7692
5L8R_CLA_1_511	38%	17%	0.157	0.912	1.58	1.98	6	11	1	1	71%	0.7077
5L8R_CLA_L_303	33%	18%	0.132	0.851	1.5	2.04	7	12	3	1	77%	0.7692
5L8R_CLA_3_310	30%	15%	0.141	0.845	1.5	2.23	7	11	5	1	77%	0.7692
5L8R_CLA_1_510	28%	13%	0.146	0.848	1.62	2.34	7	14	6	1	71%	0.7077
5L8R_CLA_K_1001	27%	16%	0.148	0.848	1.59	2.11	7	13	6	1	69%	0.6923
5L8R_CLA_3_306	22%	18%	0.152	0.803	1.5	1.99	7	13	4	1	80%	0.8
5L8R_CLA_1_513	20%	23%	0.209	0.81	1.31	1.84	7	14	1	1	100%	1
5L8R_CLA_K_1002	19%	21%	0.164	0.769	1.4	1.9	8	14	3	1	92%	0.9231
5L8R_CLA_3_312	15%	16%	0.155	0.76	1.56	2.1	8	13	0	1	74%	0.7385
5L8R_CLA_J_1105	13%	14%	0.169	0.749	1.5	2.3	6	18	5	1	77%	0.7692
5L8R_CLA_3_311	12%	15%	0.193	0.782	1.68	2.1	8	13	0	1	63%	0.6308
5L8R_CLA_H_1000	10%	21%	0.183	0.696	1.39	1.9	8	14	3	1	92%	0.9231
5L8R_CLA_K_1003	4%	7%	0.158	0.647	2.6	2.31	10	8	1	1	42%	0.4154
5L8R_CLA_K_1004	1%	7%	0.179	0.456	2.6	2.18	10	7	2	1	42%	0.4154
5GTI_CLA_a_405	100%	7%	0.036	0.982	2.11	2.77	15	30	0	1	100%	1
5V2C_CLA_B_604	99%	14%	0.049	0.986	1.64	2.25	13	20	0	1	100%	1
2D2C_CLA_O_1201	99%	10%	0.057	0.991	2.34	1.98	19	15	7	4	100%	1
7YQ7_CLA_D_401	98%	8%	0.059	0.979	2.09	2.56	19	28	0	0	100%	1
5B66_CLA_D_402	98%	11%	0.061	0.981	1.9	2.23	16	21	0	0	100%	1

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

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5L8R

CLA: CHLOROPHYLL A

CLA is a Ligand Of Interest in 5L8R designated by the RCSB