5MM0 | pdb_00005mm0


GDD: GUANOSINE-5'-DIPHOSPHATE-ALPHA-D-MANNOSE

GDD is a Ligand Of Interest in 5MM0 designated by the RCSB
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Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter5MM0_GDD_A_401Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter5MM0_GDD_A_401Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
5MM0_GDD_A_401 39% 8% 0.245 0.9553.38 1.31 14 700100%1
8SG0_GDD_A_404 98% 35% 0.062 0.9850.97 1.59 2 830100%0.57
6GPK_GDD_C_408 98% 57% 0.064 0.9840.96 0.69 1 -00100%1
2C5E_GDD_B_1372 98% 42% 0.069 0.9881.07 1.17 2 410100%1
2PK3_GDD_B_411 93% 39% 0.079 0.9741.2 1.18 1 600100%1
2C59_GDD_A_1377 87% 42% 0.108 0.9820.91 1.35 1 710100%0.5