5U6S | pdb_00005u6s


UDP: URIDINE-5'-DIPHOSPHATE

UDP is a Ligand Of Interest in 5U6S designated by the RCSB


Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter5U6S_UDP_B_503Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter5U6S_UDP_B_503Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter5U6S_UDP_B_503Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with same target (top 5)
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
5U6S_UDP_B_503 99% 9% 0.05 0.9783 1.46 13 700100%1
5U6S_UDP_A_503 96% 9% 0.062 0.9733.03 1.54 13 900100%1
5U6N_UDP_A_504 99% 8% 0.048 0.9813.09 1.62 13 700100%1
5U6M_UDP_A_502 96% 7% 0.057 0.9683.22 1.6 14 1000100%1
5V2J_UDP_B_503 86% 10% 0.112 0.9813.03 1.36 12 600100%1
5V2K_UDP_A_503 84% 11% 0.117 0.9812.98 1.24 12 500100%1
8X3Q_UDP_C_401 100% 3% 0.015 0.9983.32 2.69 13 1300100%1
8X3U_UDP_B_401 100% 3% 0.012 0.9993.31 2.68 13 1320100%1
8VH8_UDP_C_704 100% 62% 0.032 0.9950.55 0.9 - 100100%1
2B69_UDP_A_900 100% 42% 0.032 0.9921.03 1.21 2 400100%1
3H4T_UDP_A_604 100% 42% 0.039 0.991.01 1.22 2 300100%1