NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose
NAG is a Ligand Of Interest in 5VK2 designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
5VK2_NAG_B_509 | 44% | 75% | 0.157 | 0.884 | 0.42 | 0.55 | - | - | 1 | 0 | 100% | 0.9333 |
5VK2_NAG_A_506 | 32% | 87% | 0.219 | 0.895 | 0.31 | 0.39 | - | - | 0 | 0 | 100% | 0.9333 |
5VK2_NAG_C_514 | 31% | 77% | 0.224 | 0.893 | 0.37 | 0.55 | - | - | 0 | 0 | 100% | 0.9333 |
5VK2_NAG_A_512 | 31% | 77% | 0.234 | 0.901 | 0.39 | 0.53 | - | - | 1 | 0 | 100% | 0.9333 |
5VK2_NAG_b_505 | 27% | 80% | 0.211 | 0.857 | 0.33 | 0.51 | - | - | 0 | 0 | 100% | 0.9333 |
5VK2_NAG_c_507 | 19% | 78% | 0.226 | 0.823 | 0.36 | 0.53 | - | - | 0 | 0 | 100% | 0.9333 |
5VK2_NAG_A_511 | 12% | 86% | 0.276 | 0.81 | 0.29 | 0.43 | - | - | 0 | 0 | 100% | 0.9333 |
5VK2_NAG_B_508 | 11% | 87% | 0.278 | 0.799 | 0.31 | 0.39 | - | - | 0 | 0 | 100% | 0.9333 |
5VK2_NAG_a_507 | 9% | 80% | 0.302 | 0.79 | 0.34 | 0.49 | - | - | 0 | 0 | 100% | 0.9333 |
5VK2_NAG_C_506 | 9% | 90% | 0.334 | 0.821 | 0.23 | 0.37 | - | - | 0 | 0 | 100% | 0.9333 |
5VK2_NAG_B_505 | 8% | 88% | 0.276 | 0.748 | 0.31 | 0.35 | - | - | 0 | 0 | 100% | 0.9333 |
6P91_NAG_a_508 | 4% | 84% | 0.387 | 0.76 | 0.33 | 0.43 | - | - | 0 | 0 | 100% | 0.9333 |
1OC7_NAG_A_500 | 100% | 60% | 0.04 | 0.991 | 0.61 | 0.9 | - | 1 | 0 | 0 | 100% | 0.9333 |
1OC6_NAG_A_500 | 100% | 67% | 0.041 | 0.988 | 0.46 | 0.8 | - | 1 | 0 | 0 | 100% | 0.9333 |
1UWC_NAG_A_262 | 100% | 54% | 0.046 | 0.99 | 0.83 | 0.93 | - | - | 0 | 0 | 100% | 0.9333 |
6ZE6_NAG_B_703 | 100% | 52% | 0.044 | 0.984 | 0.78 | 1.07 | - | 2 | 0 | 0 | 100% | 0.8667 |
6ZE2_NAG_B_704 | 99% | 56% | 0.042 | 0.979 | 0.73 | 0.95 | - | 1 | 0 | 0 | 100% | 0.9333 |