GDP: GUANOSINE-5'-DIPHOSPHATE

GDP is a Ligand Of Interest in 5VQ0 designated by the RCSB


Best-fitted instance in this entry
Other instances in this entry
Best-fitted instance in this entry
Best-fitted PDB instances with same target (top 5)
Best-fitted instance in this entry
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
5VQ0_GDP_A_202 87% 27% 0.092 0.9641.01 1.92 1 510100%1
5VQ0_GDP_B_202 86% 26% 0.101 0.9711 1.99 1 310100%1
5UQW_GDP_A_1002 100% 47% 0.04 0.991.04 1.01 2 200100%1
6TAN_GDP_A_201 100% 55% 0.046 0.990.88 0.86 - 100100%1
7RT1_GDP_A_201 100% 53% 0.048 0.9920.96 0.87 2 100100%1
4LYF_GDP_A_201 100% 41% 0.042 0.9851.01 1.26 2 300100%1
7A1X_GDP_A_201 100% 27% 0.047 0.9890.92 1.98 1 500100%1
1RRG_GDP_A_183 100% 17% 0.036 0.9972.05 1.56 7 300100%1
2CXX_GDP_B_2401 100% 29% 0.031 0.9891.26 1.57 1 300100%1
5YMX_GDP_A_301 100% 54% 0.038 0.9940.92 0.85 1 -20100%1
5KY2_GDP_A_403 100% 48% 0.036 0.9890.98 1.04 1 100100%1
8CNJ_GDP_B_201 100% 56% 0.04 0.9920.91 0.77 1 -00100%1