5Z5C | pdb_00005z5c


PLP: PYRIDOXAL-5'-PHOSPHATE

PLP is a Ligand Of Interest in 5Z5C designated by the RCSB


Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter5Z5C_PLP_A_401Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter5Z5C_PLP_A_401Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter5Z5C_PLP_A_401Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with same target (top 5)
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
5Z5C_PLP_A_401 87% 10% 0.113 0.9852.8 1.62 4 510100%1
5Z5C_PLP_C_401 85% 9% 0.113 0.9793.06 1.43 3 510100%1
5Z5C_PLP_B_401 76% 12% 0.146 0.9822.78 1.37 3 300100%1
5Z5C_PLP_D_401 68% 8% 0.15 0.9623.1 1.6 3 510100%1
5B55_PLP_A_401 86% 27% 0.107 0.9770.91 2.02 - 500100%0.45
5B53_PLP_A_401 83% 28% 0.125 0.9841.25 1.64 1 420100%1
2BIE_PLP_A_1361 100% 38% 0.024 0.9961.23 1.19 1 310100%1
2X3L_PLP_A_1211 100% 19% 0.024 0.9951.74 1.73 2 210100%1
3CEJ_PLP_A_832 100% 41% 0.021 0.9981.23 1.05 1 280100%1
3CEM_PLP_A_832 100% 41% 0.021 0.9971.24 1.04 2 210100%1
4PPM_PLP_A_902 100% 7% 0.019 0.9982.88 1.91 9 600100%1