Ligand validation:5KAF

CLA: CHLOROPHYLL A

CLA is a Ligand Of Interest in 5KAF designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
5KAF_CLA_a_612	53%	31%	0.175	0.937	1.47	1.3	5	7	0	1	100%	1
5KAF_CLA_b_615	52%	30%	0.184	0.941	1.47	1.33	7	8	0	1	100%	1
5KAF_CLA_a_607	51%	28%	0.167	0.939	1.55	1.34	6	8	0	1	91%	0.9077
5KAF_CLA_a_606	50%	31%	0.178	0.93	1.46	1.3	6	8	0	1	100%	1
5KAF_CLA_b_614	49%	30%	0.181	0.928	1.47	1.33	5	9	0	1	100%	1
5KAF_CLA_b_610	48%	31%	0.187	0.931	1.47	1.28	5	7	0	1	100%	1
5KAF_CLA_B_612	45%	30%	0.2	0.933	1.45	1.34	6	9	0	1	100%	1
5KAF_CLA_b_606	45%	31%	0.195	0.927	1.49	1.25	6	8	0	1	100%	1
5KAF_CLA_B_605	45%	31%	0.192	0.923	1.49	1.28	6	7	0	0	100%	1
5KAF_CLA_b_608	44%	30%	0.19	0.919	1.49	1.29	6	8	0	0	100%	1
5KAF_CLA_d_403	44%	31%	0.194	0.923	1.49	1.28	5	7	0	0	100%	1
5KAF_CLA_B_615	43%	29%	0.193	0.916	1.49	1.33	5	8	0	1	100%	1
5KAF_CLA_B_602	42%	31%	0.218	0.938	1.48	1.25	5	8	0	1	100%	1
5KAF_CLA_B_607	42%	32%	0.195	0.914	1.47	1.24	5	8	0	1	100%	1
5KAF_CLA_c_503	42%	30%	0.208	0.927	1.46	1.32	5	9	0	1	100%	1
5KAF_CLA_C_501	41%	30%	0.206	0.923	1.46	1.32	5	8	0	1	100%	1
5KAF_CLA_c_509	41%	29%	0.197	0.912	1.49	1.35	5	7	0	1	100%	1
5KAF_CLA_b_616	41%	30%	0.203	0.917	1.47	1.33	5	8	0	1	100%	1
5KAF_CLA_B_610	41%	32%	0.206	0.92	1.48	1.22	5	8	0	1	100%	1
5KAF_CLA_b_613	40%	32%	0.205	0.918	1.47	1.24	5	8	0	1	100%	1
5KAF_CLA_b_612	40%	30%	0.193	0.905	1.49	1.3	5	8	0	0	100%	1
5KAF_CLA_B_611	40%	30%	0.217	0.927	1.48	1.33	5	9	0	1	100%	1
5KAF_CLA_b_607	39%	29%	0.205	0.913	1.47	1.39	6	9	0	1	100%	1
5KAF_CLA_A_607	39%	27%	0.196	0.925	1.56	1.38	6	9	0	1	88%	0.8769
5KAF_CLA_C_506	38%	30%	0.196	0.898	1.5	1.3	5	9	0	0	100%	1
5KAF_CLA_b_618	38%	29%	0.2	0.902	1.48	1.35	5	8	0	1	100%	1
5KAF_CLA_C_505	38%	30%	0.208	0.909	1.49	1.3	6	8	0	0	100%	1
5KAF_CLA_A_615	37%	31%	0.218	0.915	1.46	1.29	5	7	0	1	100%	1
5KAF_CLA_c_507	35%	30%	0.211	0.902	1.49	1.3	6	7	0	0	100%	1
5KAF_CLA_D_402	35%	31%	0.216	0.904	1.5	1.27	6	7	0	0	100%	1
5KAF_CLA_A_609	35%	29%	0.227	0.915	1.48	1.34	5	9	0	1	100%	1
5KAF_CLA_b_605	34%	31%	0.216	0.902	1.49	1.26	5	8	0	1	100%	1
5KAF_CLA_B_613	34%	30%	0.233	0.917	1.46	1.35	5	8	0	1	100%	1
5KAF_CLA_B_609	34%	30%	0.203	0.886	1.51	1.28	5	8	0	0	100%	1
5KAF_CLA_C_508	33%	30%	0.216	0.897	1.48	1.31	5	9	0	1	100%	1
5KAF_CLA_c_513	32%	29%	0.22	0.893	1.47	1.37	5	8	0	1	100%	1
5KAF_CLA_c_512	32%	30%	0.232	0.905	1.46	1.32	5	8	0	1	100%	1
5KAF_CLA_C_507	32%	29%	0.218	0.89	1.47	1.36	5	7	0	1	100%	1
5KAF_CLA_A_606	31%	31%	0.224	0.894	1.46	1.3	5	8	0	1	100%	1
5KAF_CLA_b_617	31%	31%	0.223	0.891	1.48	1.29	6	7	0	1	100%	1
5KAF_CLA_B_604	31%	29%	0.233	0.9	1.47	1.38	5	8	0	1	100%	1
5KAF_CLA_B_614	30%	31%	0.217	0.882	1.47	1.28	6	7	0	1	100%	1
5KAF_CLA_b_609	29%	30%	0.235	0.896	1.47	1.31	5	7	0	1	100%	1
5KAF_CLA_b_619	29%	31%	0.238	0.898	1.45	1.32	6	7	0	1	100%	1
5KAF_CLA_c_506	28%	30%	0.23	0.886	1.46	1.32	5	7	0	1	100%	1
5KAF_CLA_B_603	28%	31%	0.25	0.904	1.49	1.26	6	8	0	1	100%	1
5KAF_CLA_B_616	28%	30%	0.238	0.891	1.46	1.35	6	8	0	1	100%	1
5KAF_CLA_b_611	28%	31%	0.239	0.89	1.48	1.28	5	8	0	1	100%	1
5KAF_CLA_c_511	27%	30%	0.243	0.891	1.46	1.35	5	8	0	1	100%	1
5KAF_CLA_a_609	27%	31%	0.253	0.899	1.49	1.27	5	9	0	1	100%	1
5KAF_CLA_C_510	26%	31%	0.242	0.885	1.47	1.28	6	8	0	1	100%	1
5KAF_CLA_D_403	26%	30%	0.239	0.881	1.48	1.31	5	8	0	1	100%	1
5KAF_CLA_C_509	26%	30%	0.251	0.892	1.44	1.34	5	7	0	1	100%	1
5KAF_CLA_c_504	23%	30%	0.263	0.889	1.47	1.31	5	8	0	0	100%	1
5KAF_CLA_d_404	23%	30%	0.244	0.866	1.46	1.33	5	8	0	1	100%	1
5KAF_CLA_C_503	22%	30%	0.248	0.868	1.47	1.34	6	8	0	1	100%	1
5KAF_CLA_c_508	22%	30%	0.253	0.871	1.49	1.29	5	8	0	1	100%	1
5KAF_CLA_c_510	22%	27%	0.242	0.877	1.56	1.38	5	9	0	1	89%	0.8923
5KAF_CLA_C_502	22%	30%	0.255	0.87	1.47	1.31	5	8	0	0	100%	1
5KAF_CLA_B_608	21%	31%	0.281	0.895	1.48	1.29	5	8	0	1	100%	1
5KAF_CLA_c_505	20%	29%	0.268	0.873	1.48	1.34	5	8	0	1	100%	1
5KAF_CLA_C_511	19%	29%	0.256	0.848	1.48	1.35	5	8	0	0	100%	1
5KAF_CLA_c_514	18%	29%	0.269	0.854	1.46	1.39	5	8	0	1	100%	1
5KAF_CLA_C_513	18%	31%	0.29	0.875	1.46	1.28	5	8	0	1	100%	1
5KAF_CLA_C_504	17%	31%	0.273	0.856	1.46	1.3	5	7	0	1	100%	1
5KAF_CLA_B_606	17%	30%	0.279	0.861	1.48	1.33	5	9	0	1	100%	1
5KAF_CLA_B_601	15%	30%	0.291	0.854	1.47	1.32	5	8	0	1	100%	1
5KAF_CLA_b_604	14%	30%	0.28	0.836	1.47	1.33	5	8	0	1	100%	1
5KAF_CLA_C_512	12%	29%	0.297	0.827	1.5	1.35	6	8	0	1	100%	1
5KAF_CLA_c_515	12%	31%	0.304	0.832	1.47	1.3	5	8	0	1	100%	1
5GTI_CLA_a_405	100%	7%	0.036	0.982	2.11	2.77	15	30	0	1	100%	1
5V2C_CLA_B_604	99%	14%	0.049	0.986	1.64	2.25	13	20	0	1	100%	1
2D2C_CLA_O_1201	99%	10%	0.057	0.991	2.34	1.98	19	15	7	4	100%	1
7YQ7_CLA_D_401	98%	8%	0.059	0.979	2.09	2.56	19	28	0	0	100%	1
5B66_CLA_D_402	98%	11%	0.061	0.981	1.9	2.23	16	21	0	0	100%	1

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

Prepare Data

Validate Data

Deposit Data

Help and Resources

5KAF

CLA: CHLOROPHYLL A

CLA is a Ligand Of Interest in 5KAF designated by the RCSB