SQD: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL
SQD is a Ligand Of Interest in 5KAF designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 5KAF_SQD_B_626 | 21% | 34% | 0.236 | 0.845 | 0.95 | 1.65 | 4 | 12 | 0 | 0 | 100% | 1 |
| 5KAF_SQD_f_101 | 18% | 31% | 0.248 | 0.87 | 1.07 | 1.65 | 5 | 11 | 0 | 0 | 80% | 0.7963 |
| 5KAF_SQD_A_603 | 14% | 35% | 0.296 | 0.857 | 0.97 | 1.59 | 5 | 11 | 0 | 0 | 96% | 0.963 |
| 5KAF_SQD_b_601 | 12% | 38% | 0.282 | 0.808 | 0.96 | 1.45 | 5 | 9 | 0 | 0 | 100% | 1 |
| 5KAF_SQD_c_501 | 10% | 37% | 0.324 | 0.836 | 0.95 | 1.51 | 5 | 9 | 0 | 0 | 100% | 1 |
| 5KAF_SQD_D_408 | 10% | 30% | 0.27 | 0.798 | 1 | 1.78 | 4 | 11 | 0 | 0 | 87% | 0.8704 |
| 5KAF_SQD_A_619 | 7% | 47% | 0.279 | 0.79 | 0.88 | 1.17 | 2 | 2 | 0 | 0 | 74% | 0.7407 |
| 5KAF_SQD_D_409 | 7% | 32% | 0.294 | 0.79 | 1.07 | 1.62 | 5 | 11 | 0 | 0 | 80% | 0.7963 |
| 5KAF_SQD_I_101 | 2% | 47% | 0.39 | 0.702 | 0.86 | 1.19 | 2 | 2 | 0 | 0 | 74% | 0.7407 |
| 5V2C_SQD_a_413 | 94% | 21% | 0.075 | 0.976 | 1.12 | 2.14 | 4 | 12 | 0 | 0 | 100% | 1 |
| 5GTI_SQD_A_409 | 91% | 29% | 0.066 | 0.95 | 0.98 | 1.84 | 3 | 13 | 0 | 0 | 100% | 1 |
| 6DHE_SQD_A_412 | 78% | 20% | 0.113 | 0.961 | 1.05 | 2.27 | 5 | 14 | 0 | 0 | 96% | 0.963 |
| 8IRC_SQD_a_411 | 77% | 29% | 0.119 | 0.96 | 0.96 | 1.83 | 3 | 13 | 0 | 0 | 100% | 1 |
| 8IR5_SQD_a_411 | 76% | 31% | 0.123 | 0.958 | 0.95 | 1.77 | 3 | 13 | 0 | 0 | 100% | 1 |
