XYS: alpha-D-xylopyranose
XYS is a Ligand Of Interest in 6AVL designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 6AVL_XYS_A_305 | 30% | 45% | 0.116 | 0.778 | 1.57 | 0.57 | 1 | - | 0 | 0 | 100% | 0.78 |
| 6B6Q_XYS_A_306 | 63% | 42% | 0.13 | 0.925 | 1.65 | 0.64 | 1 | - | 0 | 0 | 100% | 1 |
| 6B6P_XYS_A_306 | 54% | 46% | 0.117 | 0.882 | 1.28 | 0.82 | 1 | - | 0 | 0 | 100% | 1 |
| 6B6O_XYS_A_306 | 7% | 46% | 0.196 | 0.641 | 1.39 | 0.71 | 1 | - | 0 | 0 | 100% | 1 |
| 6DZF_XYS_A_304 | 5% | 26% | 0.385 | 0.782 | 1.82 | 1.17 | 1 | 2 | 0 | 0 | 100% | 1 |
| 5A03_XYS_B_1342 | 92% | 33% | 0.063 | 0.953 | 1.68 | 1.01 | 1 | 1 | 0 | 0 | 100% | 1 |
| 8OZ1_XYS_A_804 | 91% | 61% | 0.064 | 0.967 | 0.83 | 0.66 | - | - | 0 | 0 | 90% | 0.9 |
| 8BQA_XYS_AAA_402 | 88% | 34% | 0.058 | 0.951 | 0.83 | 1.77 | - | 3 | 0 | 0 | 90% | 0.9 |
| 7PLC_XYS_C_302 | 85% | 63% | 0.096 | 0.961 | 0.55 | 0.87 | - | 1 | 1 | 0 | 100% | 1 |
| 2CDC_XYS_D_1371 | 82% | 48% | 0.1 | 0.954 | 1.01 | 0.99 | 1 | 1 | 0 | 0 | 100% | 1 |
