NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose
NAG is a Ligand Of Interest in 6D8D designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
6D8D_NAG_D_301 | 43% | 8% | 0.174 | 0.898 | 1.62 | 3.01 | 3 | 9 | 0 | 0 | 100% | 0.9333 |
6D8D_NAG_B_301 | 35% | 13% | 0.194 | 0.88 | 1.29 | 2.65 | 2 | 6 | 0 | 0 | 100% | 0.9333 |
6D8D_NAG_F_301 | 34% | 4% | 0.189 | 0.87 | 1.79 | 3.84 | 3 | 10 | 0 | 0 | 100% | 0.9333 |
6D8D_NAG_E_401 | 14% | 31% | 0.229 | 0.78 | 1.04 | 1.7 | 1 | 2 | 0 | 0 | 100% | 0.9333 |
6D8D_NAG_A_401 | 12% | 19% | 0.246 | 0.779 | 1.22 | 2.22 | 1 | 6 | 0 | 0 | 100% | 0.9333 |
6D8D_NAG_C_401 | 10% | 23% | 0.246 | 0.746 | 1.07 | 2.07 | 1 | 7 | 1 | 0 | 100% | 0.9333 |
6D7C_NAG_J_301 | 34% | 14% | 0.19 | 0.871 | 1.57 | 2.3 | 3 | 7 | 0 | 0 | 100% | 0.9333 |
6D8B_NAG_B_301 | 25% | 69% | 0.219 | 0.852 | 0.46 | 0.71 | - | 1 | 0 | 0 | 100% | 0.9333 |
3PPS_NAG_B_760 | 100% | 44% | 0.028 | 0.993 | 0.57 | 1.57 | - | 3 | 0 | 0 | 100% | 0.9333 |
4AKM_NAG_A_1379 | 100% | 67% | 0.029 | 0.994 | 0.54 | 0.73 | - | - | 0 | 0 | 100% | 0.9333 |
3CQL_NAG_B_244 | 100% | 68% | 0.029 | 0.987 | 0.42 | 0.8 | - | - | 0 | 0 | 100% | 1 |
3RIK_NAG_D_509 | 100% | 8% | 0.035 | 0.991 | 2.03 | 2.54 | 4 | 7 | 2 | 0 | 100% | 0.9333 |
5VEM_NAG_B_509 | 100% | 74% | 0.003 | 0.957 | 0.46 | 0.56 | - | - | 0 | 0 | 100% | 0.9333 |