SQD: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL
SQD is a Ligand Of Interest in 6DHE designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 6DHE_SQD_A_412 | 78% | 20% | 0.113 | 0.961 | 1.05 | 2.27 | 5 | 14 | 0 | 0 | 96% | 0.963 |
| 6DHE_SQD_a_411 | 64% | 26% | 0.13 | 0.929 | 0.99 | 1.96 | 4 | 14 | 0 | 0 | 100% | 1 |
| 6DHE_SQD_B_624 | 52% | 32% | 0.125 | 0.883 | 0.92 | 1.76 | 3 | 12 | 0 | 0 | 100% | 1 |
| 6DHE_SQD_D_408 | 41% | 30% | 0.149 | 0.925 | 1.02 | 1.73 | 3 | 10 | 0 | 0 | 67% | 0.6667 |
| 6DHE_SQD_b_601 | 38% | 26% | 0.142 | 0.859 | 0.97 | 2.02 | 3 | 13 | 0 | 0 | 91% | 0.9074 |
| 6DHE_SQD_a_412 | 26% | 36% | 0.146 | 0.846 | 1.12 | 1.39 | 2 | 5 | 0 | 0 | 67% | 0.6667 |
| 6DHE_SQD_A_413 | 25% | 39% | 0.191 | 0.879 | 1.05 | 1.33 | 3 | 2 | 0 | 0 | 72% | 0.7222 |
| 6DHE_SQD_f_101 | 20% | 31% | 0.218 | 0.863 | 1.14 | 1.59 | 5 | 10 | 0 | 0 | 76% | 0.7593 |
| 5V2C_SQD_a_413 | 94% | 21% | 0.075 | 0.976 | 1.12 | 2.14 | 4 | 12 | 0 | 0 | 100% | 1 |
| 5GTI_SQD_A_409 | 91% | 29% | 0.066 | 0.95 | 0.98 | 1.84 | 3 | 13 | 0 | 0 | 100% | 1 |
| 8IRC_SQD_a_411 | 77% | 29% | 0.119 | 0.96 | 0.96 | 1.83 | 3 | 13 | 0 | 0 | 100% | 1 |
| 8IR5_SQD_a_411 | 76% | 31% | 0.123 | 0.958 | 0.95 | 1.77 | 3 | 13 | 0 | 0 | 100% | 1 |
| 8IRF_SQD_a_410 | 76% | 29% | 0.125 | 0.96 | 0.96 | 1.83 | 3 | 13 | 0 | 0 | 100% | 0.49 |
