DGD: DIGALACTOSYL DIACYL GLYCEROL (DGDG)
DGD is a Ligand Of Interest in 6DHO designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
6DHO_DGD_C_517 | 80% | 36% | 0.094 | 0.952 | 1.13 | 1.37 | 8 | 8 | 0 | 0 | 94% | 0.9394 |
6DHO_DGD_c_516 | 78% | 33% | 0.101 | 0.953 | 1.28 | 1.39 | 6 | 12 | 0 | 0 | 94% | 0.9394 |
6DHO_DGD_c_517 | 77% | 36% | 0.094 | 0.945 | 1.09 | 1.41 | 6 | 9 | 0 | 0 | 94% | 0.9394 |
6DHO_DGD_c_518 | 73% | 35% | 0.104 | 0.942 | 1.1 | 1.46 | 6 | 15 | 0 | 0 | 94% | 0.9394 |
6DHO_DGD_H_102 | 68% | 30% | 0.104 | 0.927 | 1.32 | 1.45 | 9 | 11 | 0 | 0 | 94% | 0.9394 |
6DHO_DGD_C_516 | 67% | 36% | 0.112 | 0.929 | 1.07 | 1.44 | 4 | 12 | 0 | 0 | 94% | 0.9394 |
6DHO_DGD_h_102 | 63% | 35% | 0.116 | 0.922 | 1.03 | 1.53 | 5 | 14 | 0 | 0 | 94% | 0.9394 |
6DHO_DGD_C_515 | 62% | 31% | 0.13 | 0.933 | 1.4 | 1.33 | 9 | 9 | 0 | 0 | 94% | 0.9394 |
6DHO_DGD_A_415 | 27% | 31% | 0.187 | 0.834 | 1.25 | 1.48 | 8 | 11 | 0 | 0 | 100% | 1 |
6DHO_DGD_a_414 | 25% | 27% | 0.156 | 0.847 | 1.45 | 1.49 | 5 | 7 | 0 | 0 | 67% | 0.6667 |
5GTI_DGD_h_103 | 96% | 52% | 0.05 | 0.967 | 0.89 | 0.96 | 3 | 3 | 0 | 0 | 94% | 0.9394 |
5V2C_DGD_C_516 | 95% | 43% | 0.067 | 0.983 | 0.89 | 1.29 | 5 | 10 | 0 | 0 | 94% | 0.9394 |
7YQ7_DGD_C_518 | 87% | 51% | 0.084 | 0.967 | 0.83 | 1.07 | 3 | 5 | 0 | 0 | 94% | 0.9394 |
8IR5_DGD_C_515 | 86% | 47% | 0.092 | 0.97 | 0.81 | 1.21 | 2 | 8 | 0 | 0 | 94% | 0.9394 |
8IRC_DGD_C_517 | 85% | 47% | 0.096 | 0.973 | 0.83 | 1.2 | 2 | 8 | 0 | 0 | 94% | 0.9394 |