Ligand validation:6D8D

NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose

NAG is a Ligand Of Interest in 6D8D designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
6D8D_NAG_D_301	43%	8%	0.174	0.898	1.62	3.01	3	9	0	0	100%	0.9333
6D8D_NAG_B_301	35%	13%	0.194	0.88	1.29	2.65	2	6	0	0	100%	0.9333
6D8D_NAG_F_301	34%	4%	0.189	0.87	1.79	3.84	3	10	0	0	100%	0.9333
6D8D_NAG_E_401	14%	31%	0.229	0.78	1.04	1.7	1	2	0	0	100%	0.9333
6D8D_NAG_A_401	12%	19%	0.246	0.779	1.22	2.22	1	6	0	0	100%	0.9333
6D8D_NAG_C_401	10%	23%	0.246	0.746	1.07	2.07	1	7	1	0	100%	0.9333
6D7C_NAG_J_301	34%	14%	0.19	0.871	1.57	2.3	3	7	0	0	100%	0.9333
6D8B_NAG_B_301	25%	69%	0.219	0.852	0.46	0.71	-	1	0	0	100%	0.9333
3PPS_NAG_B_760	100%	44%	0.028	0.993	0.57	1.57	-	3	0	0	100%	0.9333
4AKM_NAG_A_1379	100%	67%	0.029	0.994	0.54	0.73	-	-	0	0	100%	0.9333
3CQL_NAG_B_244	100%	68%	0.029	0.987	0.42	0.8	-	-	0	0	100%	1
3RIK_NAG_D_509	100%	8%	0.035	0.991	2.03	2.54	4	7	2	0	100%	0.9333
5VEM_NAG_B_509	100%	74%	0.003	0.957	0.46	0.56	-	-	0	0	100%	0.9333

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.