GDP: GUANOSINE-5'-DIPHOSPHATE
GDP is a Ligand Of Interest in 8XW8 designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 8XW8_GDP_A_605 | 86% | 44% | 0.105 | 0.973 | 1.07 | 1.09 | 2 | 1 | 0 | 0 | 100% | 1 |
| 8XW8_GDP_B_605 | 85% | 45% | 0.105 | 0.972 | 0.93 | 1.19 | - | 1 | 0 | 0 | 100% | 1 |
| 8XW8_GDP_D_605 | 65% | 33% | 0.128 | 0.928 | 1.13 | 1.5 | 2 | 5 | 0 | 0 | 100% | 1 |
| 8XW8_GDP_C_605 | 60% | 29% | 0.144 | 0.93 | 1.22 | 1.62 | 2 | 9 | 0 | 0 | 100% | 1 |
| 1RRG_GDP_A_183 | 100% | 17% | 0.036 | 0.997 | 2.05 | 1.56 | 7 | 3 | 0 | 0 | 100% | 1 |
| 2CXX_GDP_B_2401 | 100% | 29% | 0.031 | 0.989 | 1.26 | 1.57 | 1 | 3 | 0 | 0 | 100% | 1 |
| 4LUC_GDP_A_204 | 100% | 40% | 0.036 | 0.992 | 1.22 | 1.11 | 2 | 2 | 0 | 0 | 100% | 1 |
| 5YMX_GDP_A_301 | 100% | 54% | 0.038 | 0.994 | 0.92 | 0.85 | 1 | - | 2 | 0 | 100% | 1 |
| 5KY2_GDP_A_403 | 100% | 48% | 0.036 | 0.989 | 0.98 | 1.04 | 1 | 1 | 0 | 0 | 100% | 1 |
