9K2D | pdb_00009k2d


MPD: (4S)-2-METHYL-2,4-PENTANEDIOL

MPD is a Ligand Of Interest in 9K2D designated by the Author
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Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter9K2D_MPD_F_302Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter9K2D_MPD_F_302Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter9K2D_MPD_F_302Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with same target (top 5)
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
9K2D_MPD_F_302 72% 90% 0.112 0.9370.27 0.33 - -00100%1
9K2D_MPD_E_301 61% 87% 0.134 0.9240.27 0.43 - -00100%1
9K2D_MPD_A_302 58% 93% 0.143 0.9230.2 0.26 - -00100%1
9K2D_MPD_K_302 56% 85% 0.136 0.9070.27 0.46 - -00100%1
9K2D_MPD_N_302 53% 87% 0.138 0.8980.25 0.43 - -00100%1
9K2D_MPD_H_302 52% 87% 0.15 0.9090.26 0.43 - -00100%1
9K2D_MPD_B_302 51% 89% 0.15 0.9050.26 0.38 - -00100%1
9K2D_MPD_D_302 46% 89% 0.142 0.8780.23 0.41 - -00100%1
9K2D_MPD_L_302 44% 90% 0.143 0.8680.26 0.34 - -00100%1
9K2D_MPD_C_303 42% 88% 0.152 0.8710.25 0.42 - -00100%1
9K2D_MPD_J_302 39% 89% 0.158 0.8630.25 0.38 - -00100%1
9K2D_MPD_I_302 33% 90% 0.163 0.8430.27 0.33 - -00100%1
9K2D_MPD_G_302 33% 90% 0.181 0.8570.25 0.34 - -00100%1
9K2D_MPD_M_302 26% 93% 0.187 0.8280.24 0.26 - -00100%1
7XBZ_MPD_B_202 83% 76% 0.109 0.9680.3 0.63 - -10100%1
9K2B_MPD_K_302 82% 91% 0.102 0.9580.11 0.47 - -10100%1
9IRM_MPD_G_202 82% 92% 0.091 0.9460.24 0.3 - -00100%1
5C90_MPD_M_201 79% 81% 0.093 0.9390.23 0.59 - -00100%1
8E7P_MPD_N_302 79% 56% 0.084 0.9290.55 1.12 - 150100%1
9D77_MPD_A_505 100% 87% 0.032 0.9980.16 0.52 - -10100%1
9H8Q_MPD_B_602 100% 82% 0.039 0.9880.35 0.44 - -30100%1
9MMI_MPD_B_301 100% 79% 0.04 0.9830.3 0.56 - -40100%1
7Z6B_MPD_B_307 99% 74% 0.057 0.9860.42 0.59 - -00100%1
7ZOB_MPD_F_202 99% 72% 0.056 0.9830.44 0.65 - -00100%1