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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Author = "Robertson, A."

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Search Summary

This query matches 27 Structures.

Refinements

Structure Determination Methodology

experimental (27)

Scientific Name of Source Organism

	Homo sapiens (6)
	Synechocystis (5)
	Escherichia coli (4)
	synthetic construct (3)
	Pseudomonas sp. KKS102 (2)
	Bos taurus (1)
	Cyanothece sp. PCC 7425 (1)
	Escherichia coli K-12 (1)
	Klebsiella pneumoniae (1)
	Leptospira interrogans serovar Copenhageni (1)

More...

Taxonomy

	Bacteria (18)
	Eukaryota (8)
	other sequences (3)
	Riboviria (1)

Experimental Method

X-RAY DIFFRACTION (27)

Polymer Entity Type

	Protein (26)
	DNA (4)

Refinement Resolution (Å)

	1.0 - 1.5 (6)
	1.5 - 2.0 (9)
	2.0 - 2.5 (2)
	2.5 - 3.0 (7)
	3.0 - 3.5 (2)
	3.5 - 4.0 (1)

Release Date

	2015 - 2019 (1)
	2020 - 2024 (25)
	2025 - 2029 (1)

Enzyme Classification Name

	Isomerases (2)
	Lyases (1)
	Oxidoreductases (1)
	Transferases (1)

Membrane Protein Annotation

	PDBTM (6)
	mpstruc (6)
	MemProtMD (4)

Symmetry Type

	Asymmetric (17)
	Cyclic (8)
	Dihedral (1)

SCOP Classification

All beta proteins (1)

AllSelected

1 to 25 of 27 Structures

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5OCC \| pdb_00005occ	Download File View File

Crystal structure of CD32b (Fc Gamma Receptor IIb) in complex with Human IgG1 Fab fragment (6G08)

Tews, I., Orr, C.

(2018) Biophys J 115: 289-299

Released	2018-07-25
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Homo sapiens
Macromolecule	6G08 Fab Light Chain (protein) 6G08 Fab heavy chain (protein) Low affinity immunoglobulin gamma Fc region receptor II-b (protein)
Unique Ligands	GOL, NAG, PO4
Unique branched monosaccharides	NAG

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6YAX \| pdb_00006yax	Download File View File

Crystal structure of CD32b (Fc Gamma Receptor IIb) in complex with Human IgG1 Fab fragment (5C05)

Fisher, H., Tews, I., Orr, C.

To be published

Released	2021-10-06
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Homo sapiens
Macromolecule	5C05 F(ab) heavy chain (protein) 5C05 F(ab) light chain (protein) Low affinity immunoglobulin gamma Fc region receptor II-c (protein)
Unique Ligands	GOL, NAG, PG4
Unique branched monosaccharides	NAG

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7ZSF \| pdb_00007zsf	Download File View File

Structure of Orange Carotenoid Protein with canthaxanthin bound

Chukhutsina, V.U., Baxter, J.M., Fadini, A., Morgan, R.M., Pope, M.A., Maghlaoui, K., Orr, C., Wagner, A., van Thor, J.J.

(2022) Nat Commun 13: 6420-6420

Released	2022-11-09
Method	X-RAY DIFFRACTION 1.36 Å
Organisms	Synechocystis
Macromolecule	Orange carotenoid-binding protein (protein)
Unique Ligands	45D, ACT, CL, GOL

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7ZSG \| pdb_00007zsg	Download File View File

Structure of Orange Carotenoid Protein with canthaxanthin bound after 1 minute of illumination

Chukhutsina, V.U., Baxter, J.M., Fadini, A., Morgan, R.M., Pope, M.A., Maghlaoui, K., Orr, C., Wagner, A., van Thor, J.J.

(2022) Nat Commun 13: 6420-6420

Released	2022-11-09
Method	X-RAY DIFFRACTION 1.39 Å
Organisms	Synechocystis
Macromolecule	Orange carotenoid-binding protein (protein)
Unique Ligands	45D, ACT, CL, GOL

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7ZSH \| pdb_00007zsh	Download File View File

Structure of Orange Carotenoid Protein with canthaxanthin bound after 2 minutes of illumination

Chukhutsina, V.U., Baxter, J.M., Fadini, A., Morgan, R.M., Pope, M.A., Maghlaoui, K., Orr, C., Wagner, A., van Thor, J.J.

(2022) Nat Commun 13: 6420-6420

Released	2022-11-09
Method	X-RAY DIFFRACTION 1.42 Å
Organisms	Synechocystis
Macromolecule	Orange carotenoid-binding protein (protein)
Unique Ligands	45D, ACT, CL, GOL

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7ZSI \| pdb_00007zsi	Download File View File

Structure of Orange Carotenoid Protein with canthaxanthin bound after 5 minutes of illumination

Chukhutsina, V.U., Baxter, J.M., Fadini, A., Morgan, R.M., Pope, M.A., Maghlaoui, K., Orr, C., Wagner, A., van Thor, J.J.

(2022) Nat Commun 13: 6420-6420

Released	2022-11-09
Method	X-RAY DIFFRACTION 1.399 Å
Organisms	Synechocystis
Macromolecule	Orange carotenoid-binding protein (protein)
Unique Ligands	45D, ACT, CL, GOL

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7ZSJ \| pdb_00007zsj	Download File View File

Structure of Orange Carotenoid Protein with canthaxanthin bound after 10 minutes of illumination

Chukhutsina, V.U., Baxter, J.M., Fadini, A., Morgan, R.M., Pope, M.A., Maghlaoui, K., Orr, C., Wagner, A., van Thor, J.J.

(2022) Nat Commun 13: 6420-6420

Released	2022-11-09
Method	X-RAY DIFFRACTION 1.41 Å
Organisms	Synechocystis
Macromolecule	Orange carotenoid-binding protein (protein)
Unique Ligands	45D, ACT, CL, GOL

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7ZVN \| pdb_00007zvn	Download File View File

Crystal structure of human Annexin A2 in complex with full phosphorothioate 5-10 2'-methoxyethyl DNA gapmer antisense oligonucleotide solved at 1.87 A resolution

Hyjek-Skladanowska, M., Anderson, B., Mykhaylyk, V., Orr, C., Wagner, A., Skowronek, K., Seth, P., Nowotny, M.

(2023) Nucleic Acids Res 51: 1409-1423

Released	2022-09-14
Method	X-RAY DIFFRACTION 1.87 Å
Organisms	Homo sapiens synthetic construct
Macromolecule	Annexin A2 (protein) 2'-methoxyethyl DNA gapmer antisense oligonucleotide (nucleic acid)
Unique Ligands	CA, GOL, MG

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7ZVX \| pdb_00007zvx	Download File View File

Crystal structure of human Annexin A2 in complex with full phosphorothioate 5-10 2'-methoxyethyl DNA gapmer antisense oligonucleotide solved at 2.4 A resolution

Hyjek-Skladanowska, M., Anderson, B., Mykhaylyk, V., Orr, C., Wagner, A., Skowronek, K., Seth, P., Nowotny, M.

(2023) Nucleic Acids Res 51: 1409-1423

Released	2022-09-14
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Homo sapiens synthetic construct
Macromolecule	Annexin A2 (protein) 2'-methoxyethyl DNA gapmer antisense oligonucleotide (nucleic acid)
Unique Ligands	CA, EDO

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8PWN \| pdb_00008pwn	Download File View File

Structure of A2A adenosine receptor A2AR-StaR2-bRIL, solved at wavelength 2.75 A

El Omari, K., Duman, R., Mykhaylyk, V., Orr, C., Romano, M., Moraes, I., Wagner, A.

(2023) Commun Chem 6: 219-219

Released	2023-10-25
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Escherichia coli Homo sapiens
Macromolecule	Adenosine receptor A2a,Soluble cytochrome b562 (protein)
Unique Ligands	CLR, OLA, TEP

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8PX0 \| pdb_00008px0	Download File View File

Structure of ribonuclease A, solved at wavelength 2.75 A

El Omari, K., Duman, R., Mykhaylyk, V., Orr, C., Romano, M., Beis, K., Wagner, A.

(2023) Commun Chem 6: 219-219

Released	2023-10-25
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Bos taurus
Macromolecule	Ribonuclease pancreatic (protein)
Unique Ligands	0U

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8PX4 \| pdb_00008px4	Download File View File

Structure of the PAS domain code by the LIC_11128 gene from Leptospira interrogans serovar Copenhageni Fiocruz, solved at wavelength 3.09 A

El Omari, K., Duman, R., Mykhaylyk, V., Orr, C., Guzzo, C.R., Owens, R.J., Wagner, A.

(2023) Commun Chem 6: 219-219

Released	2023-10-25
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Leptospira interrogans serovar Copenhageni
Macromolecule	Diguanylate cyclase (protein)

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8PX5 \| pdb_00008px5	Download File View File

Structure of the RNA recognition motif (RRM) of Seb1 from S. pombe., solved at wavelength 2.75 A

El Omari, K., Duman, R., Mykhaylyk, V., Orr, C., Wittmann, S., Renner, M., Grimes, J.M., Wagner, A.

(2023) Commun Chem 6: 219-219

Released	2023-10-25
Method	X-RAY DIFFRACTION 1.77 Å
Organisms	Schizosaccharomyces pombe 972h-
Macromolecule	Rpb7-binding protein seb1 (protein)

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8PX7 \| pdb_00008px7	Download File View File

Structure of Bacterial Multidrug Efflux transporter AcrB, solved at wavelength 3.02 A

El Omari, K., Duman, R., Mykhaylyk, V., Orr, C., Qu, F., Beis, K., Wagner, A.

(2023) Commun Chem 6: 219-219

Released	2023-10-25
Method	X-RAY DIFFRACTION 3.4 Å
Organisms	Escherichia coli K-12
Macromolecule	Multidrug efflux pump subunit AcrB (protein)

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8PX9 \| pdb_00008px9	Download File View File

Structure of the antibacterial peptide ABC transporter McjD, solved at wavelength 2.75 A

El Omari, K., Duman, R., Mykhaylyk, V., Orr, C., Bountra, K., Beis, K., Wagner, A.

(2023) Commun Chem 6: 219-219

Released	2023-10-25
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Escherichia coli
Macromolecule	Microcin-J25 export ATP-binding/permease protein McjD (protein)
Unique Ligands	ANP, MG

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8PXC \| pdb_00008pxc	Download File View File

Structure of Fap1, a domain of the accessory Sec-dependent serine-rich glycoprotein adhesin from Streptococcus oralis, solved at wavelength 3.06 A

El Omari, K., Duman, R., Mykhaylyk, V., Orr, C., Owen, C.D., Walsh, M.A., Wagner, A.

(2023) Commun Chem 6: 219-219

Released	2023-10-25
Method	X-RAY DIFFRACTION 1.973 Å
Organisms	Streptococcus oralis
Macromolecule	Fap1 (protein)
Unique Ligands	CA, EDO

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8PXG \| pdb_00008pxg	Download File View File

Structure of Streptactin, solved at wavelength 2.75 A

El Omari, K., Duman, R., Mykhaylyk, V., Orr, C., Vecchia, L., Jones, E.Y., Wagner, A.

(2023) Commun Chem 6: 219-219

Released	2023-10-25
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Streptomyces avidinii
Macromolecule	Streptavidin (protein)
Unique Ligands	CL, GOL

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8PXH \| pdb_00008pxh	Download File View File

Structure of TauA from E. coli, solved at wavelength 2.375 A

El Omari, K., Duman, R., Mykhaylyk, V., Orr, C., Qu, F., Beis, K., Wagner, A.

(2023) Commun Chem 6: 219-219

Released	2023-10-25
Method	X-RAY DIFFRACTION 1.77 Å
Organisms	Escherichia coli
Macromolecule	Taurine ABC transporter substrate-binding protein (protein)
Unique Ligands	IOD, TAU

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8PXJ \| pdb_00008pxj	Download File View File

Structure of Whitewater Arroyo virus GP1 glycoprotein, solved at wavelength 2.75 A

El Omari, K., Duman, R., Mykhaylyk, V., Orr, C., Bowden, T.A., Wagner, A.

(2023) Commun Chem 6: 219-219

Released	2023-10-25
Method	X-RAY DIFFRACTION 2.75 Å
Organisms	Mammarenavirus whitewaterense
Macromolecule	Glycoprotein G1 (protein)
Unique Ligands	CD, NAG, SO4

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8PXK \| pdb_00008pxk	Download File View File

Structure of NADH-DEPENDENT FERREDOXIN REDUCTASE, BPHA4, solved at wavelength 5.76 A

El Omari, K., Duman, R., Mykhaylyk, V., Orr, C., Senda, M., Matsugaki, N., Kawano, Y., Wagner, A.

(2023) Commun Chem 6: 219-219

Released	2023-10-25
Method	X-RAY DIFFRACTION 3.77 Å
Organisms	Pseudomonas sp. KKS102
Macromolecule	Ferredoxin reductase (protein)
Unique Ligands	FAD

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8PXL \| pdb_00008pxl	Download File View File

Structure of NADH-DEPENDENT FERREDOXIN REDUCTASE, BPHA4, solved at wavelength 1.37 A

El Omari, K., Duman, R., Mykhaylyk, V., Orr, C., Senda, M., Matsugaki, N., Kawano, Y., Wagner, A.

(2023) Commun Chem 6: 219-219

Released	2023-10-25
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Pseudomonas sp. KKS102
Macromolecule	Ferredoxin reductase (protein)
Unique Ligands	FAD, FMT, GOL

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8PYV \| pdb_00008pyv	Download File View File

Structure of Human PS-1 GSH-analog complex, solved at wavelength 2.755 A

Duman, R., El Omari, K., Mykhaylyk, V., Orr, C., Wagner, A., Vogeley, L., Brown, D.G.

(2023) Commun Chem 6: 219-219

Released	2023-10-25
Method	X-RAY DIFFRACTION 1.77 Å
Organisms	Homo sapiens
Macromolecule	Prostaglandin E synthase (protein)
Unique Ligands	48T, PLM

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8PYZ \| pdb_00008pyz	Download File View File

Structure of Ompk36GD from Klebsiella pneumonia, solved at wavelength 4.13 A

Duman, R., El Omari, K., Mykhaylyk, V., Orr, C., Kwong, H., Beis, K., Wagner, A.

(2023) Commun Chem 6: 219-219

Released	2023-10-25
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Klebsiella pneumoniae
Macromolecule	OmpK36 (protein)
Unique Ligands	C8E, LDA

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8PZ4 \| pdb_00008pz4	Download File View File

Structure of alginate transporter, AlgE, solved at wavelength 2.755 A

Duman, R., El Omari, K., Mykhaylyk, V., Orr, C., Wagner, A., Vogeley, L., Brown, D.G.

(2023) Commun Chem 6: 219-219

Released	2023-10-25
Method	X-RAY DIFFRACTION 1.77 Å
Organisms	Pseudomonas aeruginosa
Macromolecule	Alginate production protein AlgE (protein)
Unique Ligands	78M, 78N, CA, FLC, LDA, PE5, SO4

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8PZ5 \| pdb_00008pz5	Download File View File

Structure of ThcOx, solved at wavelength 3.099 A

Duman, R., El Omari, K., Mykhaylyk, V., Orr, C., Wagner, A.

(2023) Commun Chem 6: 219-219

Released	2023-10-25
Method	X-RAY DIFFRACTION 3.2 Å
Organisms	Cyanothece sp. PCC 7425
Macromolecule	SagB-type dehydrogenase domain protein (protein)
Unique Ligands	FMN

1 to 25 of 27 Structures

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

SCOP Classification

5OCC | pdb_00005occ

6YAX | pdb_00006yax

7ZSF | pdb_00007zsf

7ZSG | pdb_00007zsg

7ZSH | pdb_00007zsh

7ZSI | pdb_00007zsi

7ZSJ | pdb_00007zsj

7ZVN | pdb_00007zvn

7ZVX | pdb_00007zvx

8PWN | pdb_00008pwn

8PX0 | pdb_00008px0

8PX4 | pdb_00008px4

8PX5 | pdb_00008px5

8PX7 | pdb_00008px7

8PX9 | pdb_00008px9

8PXC | pdb_00008pxc

8PXG | pdb_00008pxg

8PXH | pdb_00008pxh

8PXJ | pdb_00008pxj

8PXK | pdb_00008pxk

8PXL | pdb_00008pxl

8PYV | pdb_00008pyv

8PYZ | pdb_00008pyz

8PZ4 | pdb_00008pz4

8PZ5 | pdb_00008pz5