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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Beale, J.H."

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Search Summary

This query matches 140 Structures.

Refinements

Structure Determination Methodology

experimental (140)

Scientific Name of Source Organism

	Cryphonectria parasitica (47)
	synthetic construct (18)
	Klebsiella pneumoniae (13)
	Methanosarcina mazei Go1 (11)
	Bos taurus (10)
	Gallus gallus (10)
	Amphitrite ornata (8)
	Streptomyces lividans TK24 (8)
	Streptomyces coelicolor A3(2) (7)
	Escherichia coli (6)

More...

Taxonomy

	Eukaryota (89)
	Bacteria (44)
	other sequences (18)
	Archaea (13)

Experimental Method

	X-RAY DIFFRACTION (139)
	NEUTRON DIFFRACTION (2)

Polymer Entity Type

	Protein (140)
	DNA (11)

Refinement Resolution (Å)

	1.0 - 1.5 (15)
	1.5 - 2.0 (83)
	2.0 - 2.5 (26)
	2.5 - 3.0 (12)
	3.0 - 3.5 (4)

Release Date

	2015 - 2019 (24)
	2020 - 2024 (109)
	2025 - 2029 (7)

Enzyme Classification Name

	Hydrolases (73)
	Oxidoreductases (31)
	Lyases (11)
	Ligases (7)

Membrane Protein Annotation

	PDBTM (11)
	mpstruc (7)
	MemProtMD (5)

Symmetry Type

	Asymmetric (113)
	Cyclic (27)

SCOP Classification

	Artifacts (8)
	Alpha and beta proteins (a+b) (13)
	All beta proteins (4)
	Multi-domain proteins (alpha and beta) (5)
	All alpha proteins (2)
	Membrane and cell surface proteins and peptides (2)

AllSelected

1 to 25 of 140 Structures

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5A9D \| pdb_00005a9d	Download File View File

Crystal structure of the extracellular domain of PepT1

Beale, J.H., Bird, L.E., Owens, R.J., Newstead, S.

(2015) Structure 23: 1889

Released	2015-09-09
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Mus musculus
Macromolecule	SOLUTE CARRIER FAMILY 15 MEMBER 1 (protein)
Unique Ligands	GOL

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5A9H \| pdb_00005a9h	Download File View File

Crystal structure of the extracellular domain of PepT2

Beale, J.H., Newstead, S.

(2015) Structure 23: 1889

Released	2015-09-09
Method	X-RAY DIFFRACTION 2.06 Å
Organisms	Rattus norvegicus
Macromolecule	SOLUTE CARRIER FAMILY 15 MEMBER 2 (protein)
Unique Ligands	ACT, CS, GOL

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5A9I \| pdb_00005a9i	Download File View File

Crystal structure of the extracellular domain of PepT2

Beale, J.H., Newstead, S.

(2015) Structure 23: 1889

Released	2015-09-09
Method	X-RAY DIFFRACTION 2.84 Å
Organisms	Rattus norvegicus
Macromolecule	SOLUTE CARRIER FAMILY 15 MEMBER 2 (protein)
Unique Ligands	CIT, GOL

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6GUY \| pdb_00006guy	Download File View File

Room temperature structure of Archaerhodopsin-3 via LCP extruder using synchrotron radiation

Moraes, I., Judge, P.J., Axford, D., Bada Juarez, J.F., Vinals, J., Watts, A.

To be published

Released	2019-10-09
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Halorubrum sodomense
Macromolecule	Archaerhodopsin-3 (protein)
Unique Ligands	CA, CL, DD9, NA, R16, RET

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6GUZ \| pdb_00006guz	Download File View File

Ground state structure of Archaerhodopsin-3 obtained from LCP crystals using a thin-film sandwich at room temperature

Moraes, I., Judge, P.J., Bada Juarez, J.F., Vinals, J., Axford, D., Watts, A.

To be published

Released	2019-10-09
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Halorubrum sodomense
Macromolecule	Archaerhodopsin-3 (protein)
Unique Ligands	CA, CL, D10, DD9, NA, R16, RET

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6I43 \| pdb_00006i43	Download File View File

SFX Structure of Damage Free Ferric State of Dye Type Peroxidase Aa from Streptomyces lividans

Ebrahim, A., Moreno-Chicano, T., Chaplin, A.K., Sherrell, D.A., Duyvesteyn, H.M.E., Owada, S., Tono, K., Sugimoto, H., Strange, R.W., Worrall, J.A.R.

(2019) IUCrJ 6: 543-551

Released	2019-09-18
Method	X-RAY DIFFRACTION 1.88 Å
Organisms	Streptomyces coelicolor A3(2)
Macromolecule	Deferrochelatase/peroxidase (protein)
Unique Ligands	HEM

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6I6G \| pdb_00006i6g	Download File View File

Dehaloperoxidase B from Amphitrite ornata - complex with 5-bromoindole

Moreno-Chicano, T., Ebrahim, A., Worrall, J.A.R., Strange, R.W., Axford, D., Sherrell, D.A., Sugimoto, H., Tono, K., Owada, S., Duyvesteyn, H.

(2019) IUCrJ 6: 1074-1085

Released	2019-11-20
Method	X-RAY DIFFRACTION 1.85 Å
Organisms	Amphitrite ornata
Macromolecule	Dehaloperoxidase B (protein)
Unique Ligands	H4N, HEM, SO4

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6I7C \| pdb_00006i7c	Download File View File

Dye type peroxidase Aa from Streptomyces lividans: imidazole complex

Moreno-Chicano, T., Ebrahim, A., Worrall, J.A.R., Strange, R.W., Axford, D., Sherrell, D.A., Sugimoto, H., Tono, K., Owada, S., Duyvesteyn, H.

(2019) IUCrJ 6: 1074-1085

Released	2019-11-20
Method	X-RAY DIFFRACTION 1.88 Å
Organisms	Streptomyces coelicolor A3(2)
Macromolecule	Deferrochelatase/peroxidase (protein)
Unique Ligands	HEM, IMD

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6I7F \| pdb_00006i7f	Download File View File

Dehaloperoxidase B from Amphitrite ornata - complex with 2,4-dichlorophenol

Moreno-Chicano, T., Ebrahim, A., Worrall, J.A.R., Strange, R.W., Axford, D., Sherrell, D.A., Sugimoto, H., Tono, K., Owada, S., Duyvesteyn, H.

(2019) IUCrJ 6: 1074-1085

Released	2019-11-20
Method	X-RAY DIFFRACTION 1.85 Å
Organisms	Amphitrite ornata
Macromolecule	Dehaloperoxidase B (protein)
Unique Ligands	5JC, HEM, SO4

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6I7Z \| pdb_00006i7z	Download File View File

Dye type peroxidase Aa from Streptomyces lividans: 32.8 kGy structure

Ebrahim, A., Moreno-Chicano, T., Worrall, J.A.R., Strange, R.W., Axford, D., Sherrell, D.A., Appleby, M., Owen, R.L.

(2019) IUCrJ 6: 543-551

Released	2019-07-31
Method	X-RAY DIFFRACTION 1.78 Å
Organisms	Streptomyces lividans TK24
Macromolecule	Deferrochelatase/peroxidase (protein)
Unique Ligands	HEM

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6I8E \| pdb_00006i8e	Download File View File

Dye type peroxidase Aa from Streptomyces lividans: 65.6 kGy structure

Ebrahim, A., Moreno-Chicano, T., Worrall, J.A.R., Strange, R.W., Axford, D., Sherrell, D.A., Appleby, M., Owen, R.L.

(2019) IUCrJ 6: 543-551

Released	2019-07-31
Method	X-RAY DIFFRACTION 1.78 Å
Organisms	Streptomyces lividans TK24
Macromolecule	Deferrochelatase/peroxidase (protein)
Unique Ligands	HEM

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6I8I \| pdb_00006i8i	Download File View File

Dye type peroxidase Aa from Streptomyces lividans: 98.4 kGy structure

Ebrahim, A., Moreno-Chicano, T., Worrall, J.A.R., Strange, R.W., Axford, D., Sherrell, D.A., Appleby, M., Owen, R.L.

(2019) IUCrJ 6: 543-551

Released	2019-07-31
Method	X-RAY DIFFRACTION 1.83 Å
Organisms	Streptomyces lividans TK24
Macromolecule	Deferrochelatase/peroxidase (protein)
Unique Ligands	HEM

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6I8J \| pdb_00006i8j	Download File View File

Dye type peroxidase Aa from Streptomyces lividans: 131.2 kGy structure

Ebrahim, A., Moreno-Chicano, T., Worrall, J.A.R., Strange, R.W., Axford, D., Sherrell, D.A., Appleby, M., Owen, R.L.

(2019) IUCrJ 6: 543-551

Released	2019-07-31
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Streptomyces lividans TK24
Macromolecule	Deferrochelatase/peroxidase (protein)
Unique Ligands	HEM

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6I8K \| pdb_00006i8k	Download File View File

Dye type peroxidase Aa from Streptomyces lividans: 164 kGy structure

Ebrahim, A., Moreno-Chicano, T., Worrall, J.A.R., Strange, R.W., Axford, D., Sherrell, D.A., Appleby, M., Owen, R.L.

(2019) IUCrJ 6: 543-551

Released	2019-07-31
Method	X-RAY DIFFRACTION 1.98 Å
Organisms	Streptomyces lividans TK24
Macromolecule	Deferrochelatase/peroxidase (protein)
Unique Ligands	HEM

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6I8O \| pdb_00006i8o	Download File View File

Dye type peroxidase Aa from Streptomyces lividans: 39.2kGy structure

Ebrahim, A., Moreno-Chicano, T., Worrall, J.A.R., Strange, R.W., Axford, D., Sherrell, D.A., Appleby, M., Owen, R.L.

(2019) IUCrJ 6: 543-551

Released	2019-07-31
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Streptomyces lividans TK24
Macromolecule	Deferrochelatase/peroxidase (protein)
Unique Ligands	HEM

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6I8P \| pdb_00006i8p	Download File View File

Dye type peroxidase Aa from Streptomyces lividans: 78.4 kGy structure

Ebrahim, A., Moreno-Chicano, T., Worrall, J.A.R., Strange, R.W., Axford, D., Sherrell, D.A., Appleby, M., Owen, R.L.

(2019) IUCrJ 6: 543-551

Released	2019-07-31
Method	X-RAY DIFFRACTION 1.73 Å
Organisms	Streptomyces coelicolor A3(2)
Macromolecule	Deferrochelatase/peroxidase (protein)
Unique Ligands	HEM

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6I8Q \| pdb_00006i8q	Download File View File

Dye type peroxidase Aa from Streptomyces lividans: 117.6 kGy structure

Ebrahim, A., Moreno-Chicano, T., Worrall, J.A.R., Strange, R.W., Axford, D., Sherrell, D.A., Appleby, M., Owen, R.L.

(2019) IUCrJ 6: 543-551

Released	2019-07-31
Method	X-RAY DIFFRACTION 1.74 Å
Organisms	Streptomyces coelicolor A3(2)
Macromolecule	Deferrochelatase/peroxidase (protein)
Unique Ligands	HEM

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6IBN \| pdb_00006ibn	Download File View File

Dye type peroxidase Aa from Streptomyces lividans: 32.8 kGy structure

Ebrahim, A., Moreno-Chicano, T., Worrall, J.A.R., Strange, R.W., Axford, D., Sherrell, D.A., Appleby, M., Owen, R.L.

(2019) IUCrJ 6: 543-551

Released	2019-07-31
Method	X-RAY DIFFRACTION 2.18 Å
Organisms	Streptomyces coelicolor A3(2)
Macromolecule	Deferrochelatase/peroxidase (protein)
Unique Ligands	HEM

Explore in 3D

6Q31 \| pdb_00006q31	Download File View File

Dye type peroxidase Aa from Streptomyces lividans: 156.8 kGy structure

Ebrahim, A., Moreno-Chicano, T., Worrall, J.A.R., Strange, R.W., Axford, D., Sherrell, D.A., Appleby, M., Owen, R.L.

(2019) IUCrJ 6: 543-551

Released	2019-07-31
Method	X-RAY DIFFRACTION 1.78 Å
Organisms	Streptomyces lividans TK24
Macromolecule	Deferrochelatase/peroxidase (protein)
Unique Ligands	HEM

Explore in 3D

6Q34 \| pdb_00006q34	Download File View File

Dye type peroxidase Aa from Streptomyces lividans: 196 kGy structure

Ebrahim, A., Moreno-Chicano, T., Worrall, J.A.R., Strange, R.W., Axford, D., Sherrell, D.A., Appleby, M., Owen, R.L.

(2019) IUCrJ 6: 543-551

Released	2019-07-31
Method	X-RAY DIFFRACTION 1.82 Å
Organisms	Streptomyces lividans TK24
Macromolecule	Deferrochelatase/peroxidase (protein)
Unique Ligands	HEM

Explore in 3D

6Q3D \| pdb_00006q3d	Download File View File

Dye type peroxidase Aa from Streptomyces lividans: 235.2 kGy structure

Ebrahim, A., Moreno-Chicano, T., Worrall, J.A.R., Strange, R.W., Axford, D., Sherrell, D.A., Appleby, M., Owen, R.L.

(2019) IUCrJ 6: 543-551

Released	2019-07-31
Method	X-RAY DIFFRACTION 1.93 Å
Organisms	Streptomyces coelicolor A3(2)
Macromolecule	Deferrochelatase/peroxidase (protein)
Unique Ligands	HEM

Explore in 3D

6Q3E \| pdb_00006q3e	Download File View File

Dye type peroxidase Aa from Streptomyces lividans: 274.4 kGy structure

Ebrahim, A., Moreno-Chicano, T., Worrall, J.A.R., Strange, R.W., Axford, D., Sherrell, D.A., Appleby, M., Owen, R.L.

(2019) IUCrJ 6: 543-551

Released	2019-07-31
Method	X-RAY DIFFRACTION 2.03 Å
Organisms	Streptomyces coelicolor A3(2)
Macromolecule	Deferrochelatase/peroxidase (protein)
Unique Ligands	HEM

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6QQ3 \| pdb_00006qq3	Download File View File

The room temperature structure of lysozyme via the acoustic levitation of a droplet

Axford, D.N., Docker, P., Dye, E., Morris, R.

(2019) Sci Rep 9: 12431-12431

Released	2019-03-06
Method	X-RAY DIFFRACTION 1.53 Å
Organisms	Gallus gallus
Macromolecule	Lysozyme C (protein)
Unique Ligands	ACT, CL, NA

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6QWG \| pdb_00006qwg	Download File View File

Serial Femtosecond Crystallography Structure of Cu Nitrite Reductase from Achromobacter cycloclastes: Nitrite complex at Room Temperature

Ebrahim, A., Moreno-Chicano, T., Appleby, M.V., Worrall, J.W., Duyvesteyn, H.M.E., Strange, R.W., Beale, J., Axford, D., Sherrell, D.A., Sugimoto, H., Owada, S., Tono, K., Owen, R.L.

(2019) IUCrJ 6: 1074-1085

Released	2019-11-20
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Achromobacter cycloclastes
Macromolecule	Copper-containing nitrite reductase (protein)
Unique Ligands	CU, NO2

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6RPD \| pdb_00006rpd	Download File View File

Structure of ferrous KpDyP in complex with cyanide

Pfanzagl, V., Beale, J., Hofbauer, S.

(2020) J Biological Chem 295: 13488-13501

Released	2020-09-02
Method	X-RAY DIFFRACTION 1.52 Å
Organisms	Klebsiella pneumoniae
Macromolecule	Iron-dependent peroxidase (protein)
Unique Ligands	CYN, GOL, HEM, MG

1 to 25 of 140 Structures

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

SCOP Classification

5A9D | pdb_00005a9d

5A9H | pdb_00005a9h

5A9I | pdb_00005a9i

6GUY | pdb_00006guy

6GUZ | pdb_00006guz

6I43 | pdb_00006i43

6I6G | pdb_00006i6g

6I7C | pdb_00006i7c

6I7F | pdb_00006i7f

6I7Z | pdb_00006i7z

6I8E | pdb_00006i8e

6I8I | pdb_00006i8i

6I8J | pdb_00006i8j

6I8K | pdb_00006i8k

6I8O | pdb_00006i8o

6I8P | pdb_00006i8p

6I8Q | pdb_00006i8q

6IBN | pdb_00006ibn

6Q31 | pdb_00006q31

6Q34 | pdb_00006q34

6Q3D | pdb_00006q3d

6Q3E | pdb_00006q3e

6QQ3 | pdb_00006qq3

6QWG | pdb_00006qwg

6RPD | pdb_00006rpd