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234,136 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Desbonnet, C."

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Search Summary

This query matches 10 Structures.

Refinements

Structure Determination Methodology

experimental (10)

Scientific Name of Source Organism

	Enterococcus faecalis (4)
	Enterococcus faecium (4)
	Pseudomonas aeruginosa (2)

Taxonomy

Bacteria (10)

Experimental Method

X-RAY DIFFRACTION (10)

Polymer Entity Type

Protein (10)

Refinement Resolution (Å)

	1.0 - 1.5 (1)
	1.5 - 2.0 (1)
	2.0 - 2.5 (2)
	2.5 - 3.0 (6)

Release Date

	2010 - 2014 (2)
	2015 - 2019 (8)

Enzyme Classification Name

	Hydrolases (2)
	Transferases (4)

Symmetry Type

	Asymmetric (10)
	Cyclic (1)

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1 to 10 of 10 Structures

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3U1Y \| pdb_00003u1y	Download File View File

Potent Inhibitors of LpxC for the Treatment of Gram-Negative Infections

Brown, M., Abramite, J., Liu, S.

(2012) J Med Chem 55: 914-923

Released	2012-01-04
Method	X-RAY DIFFRACTION 2 Å
Organisms	Pseudomonas aeruginosa
Macromolecule	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase (protein)
Unique Ligands	03I, ZN

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3UHM \| pdb_00003uhm	Download File View File

UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase in complex with inhibitor

Montgomery, J., Liu, S.

(2012) J Med Chem 55: 1662-1670

Released	2012-02-01
Method	X-RAY DIFFRACTION 1.26 Å
Organisms	Pseudomonas aeruginosa
Macromolecule	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase (protein)
Unique Ligands	EDO, GAI, RFN, ZN

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6BSQ \| pdb_00006bsq	Download File View File

Enterococcus faecalis Penicillin Binding Protein 4 (PBP4)

Moon, T.M., D'Andrea, E.D., Peti, W., Page, R.

(2018) J Biological Chem 293: 18574-18584

Released	2018-10-31
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Enterococcus faecalis
Macromolecule	PBP4 protein (protein)
Unique Ligands	CL, GOL

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6BSR \| pdb_00006bsr	Download File View File

Crystal structure of penicillin-binding protein 4 (PBP4) from Enterococcus faecalis in the benzylpenicillin bound form.

Moon, T.M., D'Andrea, E.D., Peti, W., Page, R.

(2018) J Biological Chem 293: 18574-18584

Released	2018-10-31
Method	X-RAY DIFFRACTION 2.34 Å
Organisms	Enterococcus faecalis
Macromolecule	PBP4 protein (protein)
Unique Ligands	CL, GOL, PEG, PNM

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6MKA \| pdb_00006mka	Download File View File

Crystal structure of penicillin binding protein 5 (PBP5) from Enterococcus faecium in the open conformation

Moon, T.M., Lee, C., D'Andrea, E.D., Peti, W., Page, R.

(2018) J Biological Chem 293: 18574-18584

Released	2018-10-31
Method	X-RAY DIFFRACTION 2.698 Å
Organisms	Enterococcus faecium
Macromolecule	penicillin binding protein 5 (PBP5) (protein)
Unique Ligands	SO4

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6MKF \| pdb_00006mkf	Download File View File

Crystal structure of penicillin binding protein 5 (PBP5) from Enterococcus faecium in the imipenem-bound form

Moon, T.M., Lee, C., D'Andrea, E.D., Peti, W., Page, R.

(2018) J Biological Chem 293: 18574-18584

Released	2018-10-31
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Enterococcus faecium
Macromolecule	penicillin binding protein 5 (PBP5) (protein)
Unique Ligands	IM2, SO4

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6MKG \| pdb_00006mkg	Download File View File

Crystal structure of penicillin binding protein 5 (PBP5) from Enterococcus faecium in the benzylpenicilin-bound form

Moon, T.M., Lee, C., D'Andrea, E.D., Peti, W., Page, R.

(2018) J Biological Chem 293: 18574-18584

Released	2018-10-31
Method	X-RAY DIFFRACTION 2.94 Å
Organisms	Enterococcus faecium
Macromolecule	penicillin binding protein 5 (PBP5) (protein)
Unique Ligands	PNM, SO4

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6MKH \| pdb_00006mkh	Download File View File

Crystal structure of pencillin binding protein 4 (PBP4) from Enterococcus faecalis in the imipenem-bound form

D'Andrea, E.D., Moon, T.M., Peti, W., Page, R.

(2018) J Biological Chem 293: 18574-18584

Released	2018-10-31
Method	X-RAY DIFFRACTION 2.62 Å
Organisms	Enterococcus faecalis
Macromolecule	pencillin binding protein 4 (PBP4) (protein)
Unique Ligands	IM2, PO4

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6MKI \| pdb_00006mki	Download File View File

Crystal structure of penicillin-binding protein 4 (PBP4) from Enterococcus faecalis in the ceftaroline-bound form

D'Andrea, E.D., Moon, T.M., Peti, W., Page, R.

(2018) J Biological Chem 293: 18574-18584

Released	2018-10-31
Method	X-RAY DIFFRACTION 2.984 Å
Organisms	Enterococcus faecalis
Macromolecule	penicillin-binding protein 4 (PBP4) (protein)
Unique Ligands	AI8, GOL, PO4

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6MKJ \| pdb_00006mkj	Download File View File

Crystal structure of penicillin binding protein 5 (PBP5) from Enterococcus faecium in the closed conformation

Moon, T.M., Soares, A., D'Andrea, E.D., Jaconcic, J., Peti, W., Page, R.

(2018) J Biological Chem 293: 18574-18584

Released	2018-10-31
Method	X-RAY DIFFRACTION 2.864 Å
Organisms	Enterococcus faecium
Macromolecule	penicillin binding protein 5 (PBP5) (protein)

1 to 10 of 10 Structures

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

3U1Y | pdb_00003u1y

Potent Inhibitors of LpxC for the Treatment of Gram-Negative Infections

3UHM | pdb_00003uhm

UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase in complex with inhibitor

6BSQ | pdb_00006bsq

Enterococcus faecalis Penicillin Binding Protein 4 (PBP4)

6BSR | pdb_00006bsr

Crystal structure of penicillin-binding protein 4 (PBP4) from Enterococcus faecalis in the benzylpenicillin bound form.

6MKA | pdb_00006mka

Crystal structure of penicillin binding protein 5 (PBP5) from Enterococcus faecium in the open conformation

6MKF | pdb_00006mkf

Crystal structure of penicillin binding protein 5 (PBP5) from Enterococcus faecium in the imipenem-bound form

6MKG | pdb_00006mkg

Crystal structure of penicillin binding protein 5 (PBP5) from Enterococcus faecium in the benzylpenicilin-bound form

6MKH | pdb_00006mkh

Crystal structure of pencillin binding protein 4 (PBP4) from Enterococcus faecalis in the imipenem-bound form

6MKI | pdb_00006mki

Crystal structure of penicillin-binding protein 4 (PBP4) from Enterococcus faecalis in the ceftaroline-bound form

6MKJ | pdb_00006mkj

Crystal structure of penicillin binding protein 5 (PBP5) from Enterococcus faecium in the closed conformation

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

3U1Y | pdb_00003u1y

3UHM | pdb_00003uhm

6BSQ | pdb_00006bsq

6BSR | pdb_00006bsr

6MKA | pdb_00006mka

6MKF | pdb_00006mkf

6MKG | pdb_00006mkg

6MKH | pdb_00006mkh

6MKI | pdb_00006mki

6MKJ | pdb_00006mkj