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234,136 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Tomaras, A.P."

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Search Summary

This query matches 16 Structures.

Refinements

Structure Determination Methodology

experimental (16)

Scientific Name of Source Organism

	Pseudomonas aeruginosa PAO1 (7)
	Acinetobacter baumannii (5)
	Pseudomonas aeruginosa PA1R (2)
	Acinetobacter sp. ATCC 27244 (1)
	Pseudomonas aeruginosa (1)

Taxonomy

Bacteria (16)

Experimental Method

X-RAY DIFFRACTION (16)

Polymer Entity Type

Protein (16)

Refinement Resolution (Å)

	1.0 - 1.5 (1)
	1.5 - 2.0 (5)
	2.0 - 2.5 (5)
	2.5 - 3.0 (4)
	3.0 - 3.5 (1)

Release Date

2010 - 2014 (16)

Enzyme Classification Name

	Hydrolases (14)
	Transferases (9)

Symmetry Type

	Asymmetric (11)
	Cyclic (5)

SCOP Classification

	Alpha and beta proteins (a+b) (8)
	Multi-domain proteins (alpha and beta) (8)

AllSelected

1 to 16 of 16 Structures

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3PBN \| pdb_00003pbn	Download File View File

Crystal Structure of Apo PBP3 from Pseudomonas aeruginosa

Han, S.

(2010) Proc Natl Acad Sci U S A 107: 22002-22007

Released	2010-12-22
Method	X-RAY DIFFRACTION 2 Å
Organisms	Pseudomonas aeruginosa PAO1
Macromolecule	Penicillin-binding protein 3 (protein)

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3PBO \| pdb_00003pbo	Download File View File

Crystal structure of PBP3 complexed with ceftazidime

Han, S.

(2010) Proc Natl Acad Sci U S A 107: 22002-22007

Released	2010-12-22
Method	X-RAY DIFFRACTION 1.74 Å
Organisms	Pseudomonas aeruginosa PAO1
Macromolecule	Penicillin-binding protein 3 (protein)
Unique Ligands	CAZ

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3PBQ \| pdb_00003pbq	Download File View File

Crystal structure of PBP3 complexed with imipenem

Han, S.

(2010) Proc Natl Acad Sci U S A 107: 22002-22007

Released	2010-12-22
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Pseudomonas aeruginosa PAO1
Macromolecule	Penicillin-binding protein 3 (protein)
Unique Ligands	IM2

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3PBR \| pdb_00003pbr	Download File View File

Crystal structure of PBP3 complexed with meropenem

Han, S.

(2010) Proc Natl Acad Sci U S A 107: 22002-22007

Released	2010-12-22
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Pseudomonas aeruginosa PAO1
Macromolecule	Penicillin-binding protein 3 (protein)
Unique Ligands	MER

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3PBS \| pdb_00003pbs	Download File View File

Crystal structure of PBP3 complexed with aztreonam

Han, S.

(2010) Proc Natl Acad Sci U S A 107: 22002-22007

Released	2010-12-22
Method	X-RAY DIFFRACTION 2 Å
Organisms	Pseudomonas aeruginosa PAO1
Macromolecule	Penicillin-binding protein 3 (protein)
Unique Ligands	AZR

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3PBT \| pdb_00003pbt	Download File View File

Crystal structure of PBP3 complexed with MC-1

Han, S., Evdokimov, A.

(2010) Proc Natl Acad Sci U S A 107: 22002-22007

Released	2010-12-22
Method	X-RAY DIFFRACTION 1.641 Å
Organisms	Pseudomonas aeruginosa PAO1
Macromolecule	Penicillin-binding protein 3 (protein)
Unique Ligands	UE1

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3UDF \| pdb_00003udf	Download File View File

Crystal structure of Apo PBP1a from Acinetobacter baumannii

Han, S.

(2011) J Am Chem Soc 133: 20536-20545

Released	2011-12-14
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Acinetobacter baumannii
Macromolecule	Penicillin-binding protein 1a (protein)
Unique Ligands	MES

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3UDI \| pdb_00003udi	Download File View File

Crystal structure of Acinetobacter baumannii PBP1a in complex with penicillin G

Han, S.

(2011) J Am Chem Soc 133: 20536-20545

Released	2011-12-14
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Acinetobacter baumannii
Macromolecule	Penicillin-binding protein 1a (protein)
Unique Ligands	PNM

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3UDX \| pdb_00003udx	Download File View File

Crystal structure of Acinetobacter baumannii PBP1a in complex with Imipenem

Han, S.

(2011) J Am Chem Soc 133: 20536-20545

Released	2011-12-14
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Acinetobacter baumannii
Macromolecule	Penicillin-binding protein 1a (protein)
Unique Ligands	IM2

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3UE0 \| pdb_00003ue0	Download File View File

Crystal structure of Acinetobacter baumannii PBP1a in complex with Aztreonam

Han, S.

(2011) J Am Chem Soc 133: 20536-20545

Released	2011-12-14
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Acinetobacter baumannii
Macromolecule	Penicillin-binding protein 1a (protein)
Unique Ligands	AZR

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3UE1 \| pdb_00003ue1	Download File View File

Crystal strucuture of Acinetobacter baumanni PBP1A in complex with MC-1

Han, S.

(2011) J Am Chem Soc 133: 20536-20545

Released	2011-12-14
Method	X-RAY DIFFRACTION 2.73 Å
Organisms	Acinetobacter baumannii
Macromolecule	Penicillin-binding protein 1a (protein)
Unique Ligands	UE1

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3UE3 \| pdb_00003ue3	Download File View File

Crystal structure of Acinetobacter baumanni PBP3

Han, S.

(2011) J Am Chem Soc 133: 20536-20545

Released	2011-12-14
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Acinetobacter sp. ATCC 27244
Macromolecule	Septum formation, penicillin binding protein 3, peptidoglycan synthetase (protein)

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3UHM \| pdb_00003uhm	Download File View File

UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase in complex with inhibitor

Montgomery, J., Liu, S.

(2012) J Med Chem 55: 1662-1670

Released	2012-02-01
Method	X-RAY DIFFRACTION 1.26 Å
Organisms	Pseudomonas aeruginosa
Macromolecule	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase (protein)
Unique Ligands	EDO, GAI, RFN, ZN

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4OOL \| pdb_00004ool	Download File View File

Crystal structure of PBP3 in complex with compound 14 ((2E)-2-({[(2S)-2-{[(2Z)-2-(2-amino-1,3-thiazol-4-yl)-2-{[(1,5-dihydroxy-4-oxo-1,4-dihydropyridin-2-yl)methoxy]imino}acetyl]amino}-3-oxopropyl]oxy}imino)pentanedioic acid)

Han, S., Caspers, N., Knafels, J.D.

(2014) J Med Chem 57: 3845-3855

Released	2014-05-07
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Pseudomonas aeruginosa PA1R
Macromolecule	Cell division protein FtsI [Peptidoglycan synthetase] (protein)
Unique Ligands	2U2

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4OOM \| pdb_00004oom	Download File View File

Crystal structure of PBP3 in complex with BAL30072 ((2Z)-2-(2-amino-1,3-thiazol-4-yl)-2-{[(1,5-dihydroxy-4-oxo-1,4-dihydropyridin-2-yl)methoxy]imino}-N-{(2S)-1-hydroxy-3-methyl-3-[(sulfooxy)amino]butan-2-yl}ethanamide)

Han, S., Caspers, N., Knafels, J.D.

(2014) J Med Chem 57: 3845-3855

Released	2014-05-07
Method	X-RAY DIFFRACTION 2 Å
Organisms	Pseudomonas aeruginosa PA1R
Macromolecule	Cell division protein FtsI [Peptidoglycan synthetase] (protein)
Unique Ligands	2U3

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4OON \| pdb_00004oon	Download File View File

Crystal structure of PBP1a in complex with compound 17 ((4Z,8S,11E,14S)-5-(2-amino-1,3-thiazol-4-yl)-14-(5,6-dihydroxy-1,3-dioxo-1,3-dihydro-2H-isoindol-2-yl)-8-formyl-2-methyl-6-oxo-3,10-dioxa-4,7,11-triazatetradeca-4,11-diene-2,12,14-tricarboxylic acid)

Han, S., Caspers, N., Knafels, J.D.

(2014) J Med Chem 57: 3845-3855

Released	2014-05-07
Method	X-RAY DIFFRACTION 3.2 Å
Organisms	Pseudomonas aeruginosa PAO1
Macromolecule	Penicillin-binding protein 1A (protein)
Unique Ligands	2U4

1 to 16 of 16 Structures

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

3PBN | pdb_00003pbn

Crystal Structure of Apo PBP3 from Pseudomonas aeruginosa

3PBO | pdb_00003pbo

Crystal structure of PBP3 complexed with ceftazidime

3PBQ | pdb_00003pbq

Crystal structure of PBP3 complexed with imipenem

3PBR | pdb_00003pbr

Crystal structure of PBP3 complexed with meropenem

3PBS | pdb_00003pbs

Crystal structure of PBP3 complexed with aztreonam

3PBT | pdb_00003pbt

Crystal structure of PBP3 complexed with MC-1

3UDF | pdb_00003udf

Crystal structure of Apo PBP1a from Acinetobacter baumannii

3UDI | pdb_00003udi

Crystal structure of Acinetobacter baumannii PBP1a in complex with penicillin G

3UDX | pdb_00003udx

Crystal structure of Acinetobacter baumannii PBP1a in complex with Imipenem

3UE0 | pdb_00003ue0

Crystal structure of Acinetobacter baumannii PBP1a in complex with Aztreonam

3UE1 | pdb_00003ue1

Crystal strucuture of Acinetobacter baumanni PBP1A in complex with MC-1

3UE3 | pdb_00003ue3

Crystal structure of Acinetobacter baumanni PBP3

3UHM | pdb_00003uhm

UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase in complex with inhibitor

4OOL | pdb_00004ool

Crystal structure of PBP3 in complex with compound 14 ((2E)-2-({[(2S)-2-{[(2Z)-2-(2-amino-1,3-thiazol-4-yl)-2-{[(1,5-dihydroxy-4-oxo-1,4-dihydropyridin-2-yl)methoxy]imino}acetyl]amino}-3-oxopropyl]oxy}imino)pentanedioic acid)

4OOM | pdb_00004oom

Crystal structure of PBP3 in complex with BAL30072 ((2Z)-2-(2-amino-1,3-thiazol-4-yl)-2-{[(1,5-dihydroxy-4-oxo-1,4-dihydropyridin-2-yl)methoxy]imino}-N-{(2S)-1-hydroxy-3-methyl-3-[(sulfooxy)amino]butan-2-yl}ethanamide)

4OON | pdb_00004oon

Crystal structure of PBP1a in complex with compound 17 ((4Z,8S,11E,14S)-5-(2-amino-1,3-thiazol-4-yl)-14-(5,6-dihydroxy-1,3-dioxo-1,3-dihydro-2H-isoindol-2-yl)-8-formyl-2-methyl-6-oxo-3,10-dioxa-4,7,11-triazatetradeca-4,11-diene-2,12,14-tricarboxylic acid)

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

3PBN | pdb_00003pbn

3PBO | pdb_00003pbo

3PBQ | pdb_00003pbq

3PBR | pdb_00003pbr

3PBS | pdb_00003pbs

3PBT | pdb_00003pbt

3UDF | pdb_00003udf

3UDI | pdb_00003udi

3UDX | pdb_00003udx

3UE0 | pdb_00003ue0

3UE1 | pdb_00003ue1

3UE3 | pdb_00003ue3

3UHM | pdb_00003uhm

4OOL | pdb_00004ool

4OOM | pdb_00004oom

4OON | pdb_00004oon