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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Source Organism Taxonomy Name (Full Lineage) = "Leishmania major"

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Search Summary

This query matches 262 Structures.

Refinements

Structure Determination Methodology

experimental (262)

Scientific Name of Source Organism

	Leishmania major (224)
	Leishmania major strain Friedlin (38)
	Actinomycetes (1)
	Homo sapiens (1)
	synthetic construct (1)
	uncultured bacterium (1)

Taxonomy

	Eukaryota (262)
	Bacteria (2)
	other sequences (1)

Experimental Method

	X-RAY DIFFRACTION (246)
	ELECTRON MICROSCOPY (12)
	SOLUTION NMR (4)

Polymer Entity Type

	Protein (262)
	RNA (9)
	DNA (1)

Refinement Resolution (Å)

	1.0 - 1.5 (25)
	1.5 - 2.0 (87)
	2.0 - 2.5 (94)
	2.5 - 3.0 (34)
	3.0 - 3.5 (12)
	3.5 - 4.0 (6)

Release Date

	1995 - 1999 (1)
	2000 - 2004 (12)
	2005 - 2009 (40)
	2010 - 2014 (85)
	2015 - 2019 (75)
	2020 - 2024 (45)
	2025 - 2029 (4)

Enzyme Classification Name

	Transferases (101)
	Oxidoreductases (48)
	Hydrolases (23)
	Lyases (19)
	Isomerases (9)
	Ligases (13)

Symmetry Type

	Asymmetric (136)
	Cyclic (95)
	Dihedral (35)
	Tetrahedral (1)
	Helical (3)

SCOP Classification

	Alpha and beta proteins (a/b) (51)
	Alpha and beta proteins (a+b) (32)
	Artifacts (37)
	All alpha proteins (22)
	Small proteins (4)
	Multi-domain proteins (alpha and beta) (3)
	All beta proteins (5)

AllSelected

1 to 25 of 262 Structures

Page 1 of 11

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1E7W \| pdb_00001e7w	Download File View File

One active site, two modes of reduction correlate the mechanism of leishmania pteridine reductase with pterin metabolism and antifolate drug resistance in trpanosomes

Gourley, D.G., Hunter, W.N.

(2001) Nat Struct Biol 8: 521

Released	2001-09-06
Method	X-RAY DIFFRACTION 1.75 Å
Organisms	Leishmania major
Macromolecule	PTERIDINE REDUCTASE (protein)
Unique Ligands	EDO, MTX, NDP

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1E92 \| pdb_00001e92	Download File View File

Pteridine reductase 1 from Leishmania major complexed with NADP+ and dihydrobiopterin

Schuettelkopf, A.W., Hunter, W.N.

(2001) Nat Struct Biol 8: 521

Released	2001-10-05
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Leishmania major
Macromolecule	PTERIDINE REDUCTASE 1 (protein)
Unique Ligands	EDO, HBI, NAP

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1EZR \| pdb_00001ezr	Download File View File

CRYSTAL STRUCTURE OF NUCLEOSIDE HYDROLASE FROM LEISHMANIA MAJOR

Shi, W., Schramm, V.L., Almo, S.C.

(1999) J Biological Chem 274: 21114-21120

Released	2000-05-24
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Leishmania major
Macromolecule	NUCLEOSIDE HYDROLASE (protein)
Unique Ligands	CA

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1LML \| pdb_00001lml	Download File View File

LEISHMANOLYSIN

Schlagenhauf, E., Etges, R., Metcalf, P.

(1998) Structure 6: 1035-1046

Released	1997-09-17
Method	X-RAY DIFFRACTION 1.86 Å
Organisms	Leishmania major
Macromolecule	LEISHMANOLYSIN (protein)
Unique Ligands	ZN

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1OKG \| pdb_00001okg	Download File View File

3-mercaptopyruvate sulfurtransferase from Leishmania major

Alphey, M.S., Hunter, W.N.

(2003) J Biological Chem 278: 48219

Released	2003-09-11
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Leishmania major
Macromolecule	POSSIBLE 3-MERCAPTOPYRUVATE SULFURTRANSFERASE (protein)
Unique Ligands	CA, SO3

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1R75 \| pdb_00001r75	Download File View File

Leishmania major hypothetical protein

Han, G.W., Merritt, E.A., Structural Genomics of Pathogenic Protozoa Consortium (SGPP)

To be published

Released	2003-12-02
Method	X-RAY DIFFRACTION 1.86 Å
Organisms	Leishmania major
Macromolecule	hypothetical protein (protein)
Unique Ligands	GOL

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1SVV \| pdb_00001svv	Download File View File

Initial Stuctural Analysis of Leishmania major Threonine Aldolase

Hol, W.G.J., Robien, M.A., Structural Genomics of Pathogenic Protozoa Consortium (SGPP)

To be published

Released	2004-08-17
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Leishmania major
Macromolecule	THREONINE ALDOLASE (protein)
Unique Ligands	UNL

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1TC5 \| pdb_00001tc5	Download File View File

Structural Analysis of a probable eukaryotic D-amino acid tRNA deacylase

Robien, M.A., Hol, W.G.J., Structural Genomics of Pathogenic Protozoa Consortium (SGPP)

To be published

Released	2004-06-08
Method	X-RAY DIFFRACTION 1.93 Å
Organisms	Leishmania major
Macromolecule	Probable eukaryotic D-amino acid tRNA deacylase, LMAJ005534AAA (protein)

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1VJU \| pdb_00001vju	Download File View File

Coproporphyrinogen III oxidase from Leishmania major

Structural Genomics of Pathogenic Protozoa Consortium (SGPP)

To be published

Released	2004-04-13
Method	X-RAY DIFFRACTION 1.401 Å
Organisms	Leishmania major
Macromolecule	Coproporphyrinogen III oxidase (protein)

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1W0C \| pdb_00001w0c	Download File View File

Inhibition of Leishmania major pteridine reductase (PTR1) by 2,4,6-triaminoquinazoline; structure of the NADP ternary complex.

Mcluskey, K., Gibellini, F., Carvalho, P., Avery, M., Hunter, W.

(2004) Acta Crystallogr D Biol Crystallogr 60: 1780

Released	2004-09-30
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Leishmania major
Macromolecule	PTERIDINE REDUCTASE (protein)
Unique Ligands	NAP, TAQ

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1XN4 \| pdb_00001xn4	Download File View File

PUTATIVE MAR1 RIBONUCLEASE FROM LEISHMANIA MAJOR

Caruthers, J., Merritt, E.A., Structural Genomics of Pathogenic Protozoa Consortium (SGPP)

(2005) Protein Sci 14: 2887-2894

Released	2004-10-12
Method	X-RAY DIFFRACTION 3.8 Å
Organisms	Leishmania major
Macromolecule	ribonuclease MAR1 (protein)

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1XTP \| pdb_00001xtp	Download File View File

Structural Analysis of Leishmania major LMAJ004091AAA, a SAM-dependent methyltransferase of the DUF858/Pfam05891 family

Robien, M.A., Hol, W.G.J., Structural Genomics of Pathogenic Protozoa Consortium (SGPP)

To be published

Released	2004-11-09
Method	X-RAY DIFFRACTION 1.94 Å
Organisms	Leishmania major strain Friedlin
Macromolecule	LMAJ004091AAA (protein)
Unique Ligands	SAI

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1Y1X \| pdb_00001y1x	Download File View File

Structural analysis of a homolog of programmed cell death 6 protein from Leishmania major Friedlin

Robien, M.A., Hol, W.G.J., Structural Genomics of Pathogenic Protozoa Consortium (SGPP)

To be published

Released	2004-12-07
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Leishmania major strain Friedlin
Macromolecule	Leishmania Major Homolog of Programmed Cell Death 6 Protein (protein)
Unique Ligands	CA, SO4

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1Y63 \| pdb_00001y63	Download File View File

Initial crystal structural analysis of a probable kinase from Leishmania major Friedlin

Robien, M.A., Hol, W.G.J., Structural Genomics of Pathogenic Protozoa Consortium (SGPP)

To be published

Released	2005-01-04
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Leishmania major strain Friedlin
Macromolecule	Lmaj004144AAA protein (protein)
Unique Ligands	ADP, BR, MN, NA

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1YF9 \| pdb_00001yf9	Download File View File

Structural analysis of Leishmania major ubiquitin conjugating enzyme E2

Structural Genomics of Pathogenic Protozoa Consortium (SGPP)

To be published

Released	2005-02-22
Method	X-RAY DIFFRACTION 2 Å
Organisms	Leishmania major
Macromolecule	Ubiquitin carrier protein 4 (protein)
Unique Ligands	CL

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1YQF \| pdb_00001yqf	Download File View File

Hypothetical protein from leishmania major unknown function sequence homologue to human p32 protein

Caruthers, J., Merritt, E.A., Structural Genomics of Pathogenic Protozoa Consortium (SGPP)

To be published

Released	2005-02-22
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Leishmania major
Macromolecule	hypothetical protein Lmaj011689 (protein)

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1Z2Q \| pdb_00001z2q	Download File View File

High-resolution solution structure of the LM5-1 FYVE domain from Leishmania major

Mertens, H.D.T., Callaghan, J.M., McConville, M.J., Gooley, P.R.

(2007) Protein Sci 16: 2552-2559

Released	2005-04-19
Method	SOLUTION NMR
Organisms	Leishmania major
Macromolecule	LM5-1 (protein)

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2A0U \| pdb_00002a0u	Download File View File

Crystal structure of the eukaryotic initiation factor 2B from Leishmania major at 2.1 A resolution

Bosch, J., Hol, W.G.J., Structural Genomics of Pathogenic Protozoa Consortium (SGPP)

To be published

Released	2005-08-02
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Leishmania major
Macromolecule	initiation factor 2B (protein)
Unique Ligands	SO4

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2AR1 \| pdb_00002ar1	Download File View File

Structure of Hypothetical protein from Leishmania major

Arakaki, T.L., Merritt, E.A., Structural Genomics of Pathogenic Protozoa Consortium (SGPP)

(2006) Acta Crystallogr Sect F Struct Biol Cryst Commun 62: 175-179

Released	2005-08-30
Method	X-RAY DIFFRACTION 1.602 Å
Organisms	Leishmania major
Macromolecule	hypothetical protein (protein)
Unique Ligands	GOL

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2B4W \| pdb_00002b4w	Download File View File

Hypothetical protein from leishmania major

Holmes, M.A., Merritt, E.A., Structural Genomics of Pathogenic Protozoa Consortium (SGPP)

To be published

Released	2005-10-04
Method	X-RAY DIFFRACTION 1.98 Å
Organisms	Leishmania major
Macromolecule	hypothetical protein, conserved (protein)

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2BF7 \| pdb_00002bf7	Download File View File

Leishmania major pteridine reductase 1 in complex with NADP and biopterin

Schuettelkopf, A.W., Hunter, W.N.

(2005) J Mol Biology 352: 105

Released	2005-08-31
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Leishmania major
Macromolecule	PTERIDINE REDUCTASE 1 (protein)
Unique Ligands	EDO, HBI, NAP

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2BFA \| pdb_00002bfa	Download File View File

Leishmania major pteridine reductase 1 in complex with NADP and CB3717

Schuettelkopf, A.W., Hunter, W.N.

(2005) J Mol Biology 352: 105

Released	2005-08-31
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Leishmania major
Macromolecule	PTERIDINE REDUCTASE 1 (protein)
Unique Ligands	CB3, EDO, NDP

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2BFM \| pdb_00002bfm	Download File View File

Leishmania major pteridine reductase 1 in complex with NADP and trimethoprim

Schuettelkopf, A.W., Hunter, W.N.

(2005) J Mol Biology 352: 105

Released	2005-08-31
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Leishmania major
Macromolecule	PTERIDINE REDUCTASE 1 (protein)
Unique Ligands	NDP, TOP

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2BFO \| pdb_00002bfo	Download File View File

Leishmania major pteridine reductase 1 in complex with NADPH

Schuettelkopf, A.W., Hunter, W.N.

(2005) J Mol Biology 352: 105

Released	2005-08-31
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Leishmania major
Macromolecule	PTERIDINE REDUCTASE 1 (protein)
Unique Ligands	EDO, NDP

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2BFP \| pdb_00002bfp	Download File View File

Leishmania major pteridine reductase 1 in complex with NADP and tetrahydrobiopterin

Schuettelkopf, A.W., Hunter, W.N.

(2005) J Mol Biology 352: 105

Released	2005-08-31
Method	X-RAY DIFFRACTION 2.55 Å
Organisms	Leishmania major
Macromolecule	PTERIDINE REDUCTASE 1 (protein)
Unique Ligands	EDO, H4B, NAP

1 to 25 of 262 Structures

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

1E7W | pdb_00001e7w

1E92 | pdb_00001e92

1EZR | pdb_00001ezr

1LML | pdb_00001lml

1OKG | pdb_00001okg

1R75 | pdb_00001r75

1SVV | pdb_00001svv

1TC5 | pdb_00001tc5

1VJU | pdb_00001vju

1W0C | pdb_00001w0c

1XN4 | pdb_00001xn4

1XTP | pdb_00001xtp

1Y1X | pdb_00001y1x

1Y63 | pdb_00001y63

1YF9 | pdb_00001yf9

1YQF | pdb_00001yqf

1Z2Q | pdb_00001z2q

2A0U | pdb_00002a0u

2AR1 | pdb_00002ar1

2B4W | pdb_00002b4w

2BF7 | pdb_00002bf7

2BFA | pdb_00002bfa

2BFM | pdb_00002bfm

2BFO | pdb_00002bfo

2BFP | pdb_00002bfp