RCSB PDB: Search

1TWY \| pdb_00001twy	Download File View File

Crystal structure of an ABC-type phosphate transport receptor from Vibrio cholerae

Ramagopal, U.A., Patskovsky, Y., Almo, S.C., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)

To be published

Released	2004-12-21
Method	X-RAY DIFFRACTION 1.65 Å
Organisms	Vibrio cholerae O1 biovar El Tor str. N16961
Macromolecule	ABC transporter, periplasmic substrate-binding protein (protein)
Unique Ligands	MG, PO4

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1U9D \| pdb_00001u9d	Download File View File

Structure of Protein of Unknown Function from Vibrio cholerae O1 biovar eltor str. N16961

Binkowski, T.A., Wu, R., Moy, S.F., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)

To be published

Released	2004-09-21
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Vibrio cholerae O1 biovar El Tor str. N16961
Macromolecule	hypothetical protein VC0714 (protein)
Unique Ligands	PO4

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1Y89 \| pdb_00001y89	Download File View File

Crystal Structure of devB protein

Lazarski, K., Cymborowski, M., Chruszcz, M., Zheng, H., Zhang, R., Lezondra, L., Joachimiak, A., Minor, W., Midwest Center for Structural Genomics (MCSG)

To be published

Released	2005-01-25
Method	X-RAY DIFFRACTION 2 Å
Organisms	Vibrio cholerae O1 biovar El Tor str. N16961
Macromolecule	devB protein (protein)
Unique Ligands	2PE, PE5, PEG, PO4

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1Y9B \| pdb_00001y9b	Download File View File

Structure of Conserved Putative Transcriptional Factor from Vibrio cholerae O1 biovar eltor str. N16961

Binkowski, T.A., Hatzos, C., Quartey, P., Moy, S., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)

To be published

Released	2005-01-25
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Vibrio cholerae O1 biovar El Tor str. N16961
Macromolecule	conserved hypothetical protein (protein)

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1Z05 \| pdb_00001z05	Download File View File

Crystal structure of the ROK family transcriptional regulator, homolog of E.coli MLC protein.

Minasov, G., Brunzelle, J.S., Shuvalova, L., Collart, F.R., Anderson, W.F., Midwest Center for Structural Genomics (MCSG)

To be published

Released	2005-03-08
Method	X-RAY DIFFRACTION 2 Å
Organisms	Vibrio cholerae O1 biovar El Tor str. N16961
Macromolecule	transcriptional regulator, ROK family (protein)
Unique Ligands	BME, GOL, SO4, ZN

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2A3V \| pdb_00002a3v	Download File View File

Structural basis for broad DNA-specificity in integron recombination

MacDonald, D., Demarre, G., Bouvier, M., Mazel, D., Gopaul, D.N.

(2006) Nature 440: 1157-1162

Released	2006-05-02
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Vibrio cholerae O1 biovar El Tor str. N16961
Macromolecule	site-specific recombinase IntI4 (protein) DNA (31-MER) (nucleic acid) DNA (34-MER) (nucleic acid)

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2D7V \| pdb_00002d7v	Download File View File

Structure of OsmC-like Protein of Unknown Function VCA0330 from Vibrio cholerae O1 biovar eltor str. N16961

Binkowski, T.A., Hatzos, C., Moy, S., Collart, F., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)

To be published

Released	2006-01-10
Method	X-RAY DIFFRACTION 1.97 Å
Organisms	Vibrio cholerae O1 biovar El Tor str. N16961
Macromolecule	Hypothetical protein VCA0330 (protein)

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2FCK \| pdb_00002fck	Download File View File

Structure of a putative ribosomal-protein-serine acetyltransferase from Vibrio cholerae.

Cuff, M.E., Li, H., Moy, S., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)

(2007) Proteins 69: 422-427

Released	2006-02-28
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Vibrio cholerae O1 biovar El Tor str. N16961
Macromolecule	ribosomal-protein-serine acetyltransferase, putative (protein)
Unique Ligands	GOL, NO3

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2KHD \| pdb_00002khd	Download File View File

Solution NMR structure of VC_A0919 from Vibrio cholerae. Northeast Structural Genomics Consortium Target VcR52

Ramelot, T.A., Cort, J.R., Wang, H., Ciccosanti, C., Jiang, M., Liu, J., Rost, B., Swapna, G.V.T., Acton, T.B., Xiao, R., Everett, J.K., Montelione, G.T., Kennedy, M.A., Northeast Structural Genomics Consortium (NESG)

To be published

Released	2009-06-16
Method	SOLUTION NMR
Organisms	Vibrio cholerae O1 biovar El Tor str. N16961
Macromolecule	Uncharacterized protein VC_A0919 (protein)

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2QWV \| pdb_00002qwv	Download File View File

Crystal structure of unknown function protein VCA1059

Chang, C., Sather, A., Moy, S., Freeman, L., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)

To be published

Released	2007-08-21
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Vibrio cholerae O1 biovar El Tor str. N16961
Macromolecule	UPF0217 protein VC_A1059 (protein)
Unique Ligands	ACY

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2WK7 \| pdb_00002wk7	Download File View File

Structure of apo form of Vibrio cholerae CqsA

Jahan, N., Potter, J.A., Sheikh, M.A., Botting, C.H., Shirran, S.L., Westwood, N.J., Taylor, G.L.

(2009) J Mol Biology 392: 763

Released	2009-07-21
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Vibrio cholerae O1 biovar El Tor str. N16961
Macromolecule	CAI-1 AUTOINDUCER SYNTHASE (protein)
Unique Ligands	SO4

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2WK8 \| pdb_00002wk8	Download File View File

Structure of holo form of Vibrio cholerae CqsA

Jahan, N., Potter, J.A., Sheikh, M.A., Botting, C.H., Shirran, S.L., Westwood, N.J., Taylor, G.L.

(2009) J Mol Biology 392: 763

Released	2009-07-21
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Vibrio cholerae O1 biovar El Tor str. N16961
Macromolecule	CAI-1 AUTOINDUCER SYNTHASE (protein)
Unique Ligands	PLP, SO4

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2WK9 \| pdb_00002wk9	Download File View File

Structure of Plp_Thr aldimine form of Vibrio cholerae CqsA

Jahan, N., Potter, J.A., Sheikh, M.A., Botting, C.H., Shirran, S.L., Westwood, N.J., Taylor, G.L.

(2009) J Mol Biology 392: 763

Released	2009-07-21
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Vibrio cholerae O1 biovar El Tor str. N16961
Macromolecule	CAI-1 AUTOINDUCER SYNTHASE (protein)
Unique Ligands	PLG, PLP, SO4

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2WKA \| pdb_00002wka	Download File View File

Structure of Plp_Thr_decanoyl-CoA aldimine form of Vibrio cholerae CqsA

Jahan, N., Potter, J.A., Sheikh, M.A., Botting, C.H., Shirran, S.L., Westwood, N.J., Taylor, G.L.

(2009) J Mol Biology 392: 763

Released	2009-07-21
Method	X-RAY DIFFRACTION 1.91 Å
Organisms	Vibrio cholerae O1 biovar El Tor str. N16961
Macromolecule	CAI-1 AUTOINDUCER SYNTHASE (protein)
Unique Ligands	CL, P89, SO4

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3BJN \| pdb_00003bjn	Download File View File

Crystal structure of C-terminal domain of putative transcriptional regulator from Vibrio cholerae, targeted domain 79-240

Chang, C., Volkart, L., Clancy, S., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)

To be published

Released	2007-12-11
Method	X-RAY DIFFRACTION 1.65 Å
Organisms	Vibrio cholerae O1 biovar El Tor str. N16961
Macromolecule	Transcriptional regulator, putative (protein)
Unique Ligands	CL

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3BP1 \| pdb_00003bp1	Download File View File

Crystal structure of putative 7-cyano-7-deazaguanine reductase QueF from Vibrio cholerae O1 biovar eltor

Kim, Y., Zhou, M., Moy, S., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)

(2010) J Mol Biology 404: 127-137

Released	2008-01-08
Method	X-RAY DIFFRACTION 1.53 Å
Organisms	Vibrio cholerae O1 biovar El Tor str. N16961
Macromolecule	NADPH-dependent 7-cyano-7-deazaguanine reductase (protein)
Unique Ligands	GUN, MG, PO4, POP

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3BV6 \| pdb_00003bv6	Download File View File

Crystal structure of uncharacterized metallo protein from Vibrio cholerae with beta-lactamase like fold

Minasov, G., Shuvalova, L., Brunzelle, J.S., Yang, X., Collart, F.R., Joachimiak, A., Anderson, W.F., Midwest Center for Structural Genomics (MCSG)

To be published

Released	2008-01-29
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Vibrio cholerae O1 biovar El Tor str. N16961
Macromolecule	Metal-dependent hydrolase (protein)
Unique Ligands	FE

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3C8C \| pdb_00003c8c	Download File View File

Crystal structure of Mcp_N and cache domains of methyl-accepting chemotaxis protein from Vibrio cholerae

Patskovsky, Y., Ozyurt, S., Freeman, J., Hu, S., Smith, D., Wasserman, S.R., Sauder, J.M., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)

To be published

Released	2008-02-19
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Vibrio cholerae O1 biovar El Tor str. N16961
Macromolecule	Methyl-accepting chemotaxis protein (protein)
Unique Ligands	ALA, MG

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3EER \| pdb_00003eer	Download File View File

High resolution structure of putative organic hydroperoxide resistance protein from Vibrio cholerae O1 biovar eltor str. N16961

Nocek, B., Maltseva, N., Kwon, K., Anderson, W.F., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)

To be published

Released	2008-10-21
Method	X-RAY DIFFRACTION 1.45 Å
Organisms	Vibrio cholerae O1 biovar El Tor str. N16961
Macromolecule	Organic hydroperoxide resistance protein, putative (protein)
Unique Ligands	ACT, IMD, ZN

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3EEV \| pdb_00003eev	Download File View File

Crystal Structure of Chloramphenicol Acetyltransferase VCA0300 from Vibrio cholerae O1 biovar eltor

Kim, Y., Maltseva, N., Kwon, K., Anderson, W.F., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)

To be published

Released	2008-09-16
Method	X-RAY DIFFRACTION 2.61 Å
Organisms	Vibrio cholerae O1 biovar El Tor str. N16961
Macromolecule	Chloramphenicol acetyltransferase (protein)
Unique Ligands	MPD

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3GH1 \| pdb_00003gh1	Download File View File

Crystal structure of predicted nucleotide-binding protein from Vibrio cholerae

Malashkevich, V.N., Toro, R., Wasserman, S., Sauder, J.M., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)

To be published

Released	2009-03-10
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Vibrio cholerae O1 biovar El Tor str. N16961
Macromolecule	Predicted nucleotide-binding protein (protein)
Unique Ligands	PO4

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3I07 \| pdb_00003i07	Download File View File

Crystal structure of a putative organic hydroperoxide resistance protein from Vibrio cholerae O1 biovar eltor str. N16961

Nocek, B., Maltseva, N., Kwon, K., Anderson, W., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)

To be published

Released	2009-08-11
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Vibrio cholerae O1 biovar El Tor str. N16961
Macromolecule	Organic hydroperoxide resistance protein (protein)
Unique Ligands	GOL, MES

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3I99 \| pdb_00003i99	Download File View File

The crystal structure of the UDP-N-acetylenolpyruvoylglucosamine reductase from the Vibrio cholerae O1 biovar Tor

Zhang, R., Gu, M., Peterson, S., Anderson, W., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)

To be published

Released	2009-10-20
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Vibrio cholerae O1 biovar El Tor str. N16961
Macromolecule	UDP-N-acetylenolpyruvoylglucosamine reductase (protein)
Unique Ligands	FAD, PO4

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3IQ1 \| pdb_00003iq1	Download File View File

Crystal structure of DPS protein from Vibrio cholerae O1, a member of a broad superfamily of ferritin-like diiron-carboxylate proteins

Nocek, B., Peterson, S., Gu, M., Otwinowski, Z., Anderson, W., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)

To be published

Released	2009-09-08
Method	X-RAY DIFFRACTION 1.67 Å
Organisms	Vibrio cholerae O1 biovar El Tor str. N16961
Macromolecule	DPS family protein (protein)
Unique Ligands	CL

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3J9G \| pdb_00003j9g	Download File View File

Atomic model of the VipA/VipB, the type six secretion system contractile sheath of Vibrio cholerae from cryo-EM

Kudryashev, M., Wang, R.Y.-R., Brackmann, M., Scherer, S., Maier, T., Baker, D., DiMaio, F., Stahlberg, H., Egelman, E.H., Basler, M.

(2015) Cell 160: 952-962

Released	2015-03-11
Method	ELECTRON MICROSCOPY 3.5 Å
Organisms	Vibrio cholerae O1 biovar El Tor str. N16961
Macromolecule	VipA (protein) VipB (protein)

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

SCOP Classification

1TWY | pdb_00001twy

1U9D | pdb_00001u9d

1Y89 | pdb_00001y89

1Y9B | pdb_00001y9b

1Z05 | pdb_00001z05

2A3V | pdb_00002a3v

2D7V | pdb_00002d7v

2FCK | pdb_00002fck

2KHD | pdb_00002khd

2QWV | pdb_00002qwv

2WK7 | pdb_00002wk7

2WK8 | pdb_00002wk8

2WK9 | pdb_00002wk9

2WKA | pdb_00002wka

3BJN | pdb_00003bjn

3BP1 | pdb_00003bp1

3BV6 | pdb_00003bv6

3C8C | pdb_00003c8c

3EER | pdb_00003eer

3EEV | pdb_00003eev

3GH1 | pdb_00003gh1

3I07 | pdb_00003i07

3I99 | pdb_00003i99

3IQ1 | pdb_00003iq1

3J9G | pdb_00003j9g