RCSB PDB: Search

2KIE \| pdb_00002kie	Download File View File

A PH domain within OCRL bridges clathrin mediated membrane trafficking to phosphoinositide metabolis

Mao, Y., Balkin, D.M., Zoncu, R., Erdmann, K., Tomasini, L., Hu, F., Jin, M.M., Hodsdon, M.E., De Camilli, P.

(2009) EMBO J 28: 1831-1842

Released	2009-07-21
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	Inositol polyphosphate 5-phosphatase OCRL-1 (protein)

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2QV2 \| pdb_00002qv2	Download File View File

A role of the Lowe syndrome protein OCRL in early steps of the endocytic pathway

Mao, Y., Erdman, K.S., McCrea, H.J., De Camilli, P.

(2007) Dev Cell 13: 377-390

Released	2007-08-21
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Homo sapiens
Macromolecule	Inositol polyphosphate 5-phosphatase OCRL-1 (protein)

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2YSX \| pdb_00002ysx	Download File View File

Solution structure of the human SHIP SH2 domain

Kasai, T., Koshiba, S., Watanabe, S., Harada, T., Kigawa, T., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)

To be published

Released	2008-04-08
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	Signaling inositol polyphosphate phosphatase SHIP II (protein)

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3QBT \| pdb_00003qbt	Download File View File

Crystal structure of OCRL1 540-678 in complex with Rab8a:GppNHp

Hou, X., Hagemann, N., Schoebel, S., Blankenfeldt, W., Goody, R.S., Erdmann, K.S., Itzen, A.

(2011) EMBO J 30: 1659-1670

Released	2011-03-23
Method	X-RAY DIFFRACTION 2 Å
Organisms	Homo sapiens
Macromolecule	Inositol polyphosphate 5-phosphatase OCRL-1 (protein) Ras-related protein Rab-8A (protein)
Unique Ligands	GNP, MG, SO4

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3QIS \| pdb_00003qis	Download File View File

Recognition of the F&H motif by the Lowe Syndrome protein OCRL

Pirruccello, M., Swan, L.E., Folta-Stogniew, E., De Camilli, P.

(2011) Nat Struct Mol Biol 18: 789-795

Released	2011-06-15
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Homo sapiens
Macromolecule	Inositol polyphosphate 5-phosphatase OCRL-1 (protein) Protein FAM109A (protein)

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4CMN \| pdb_00004cmn	Download File View File

Crystal structure of OCRL in complex with a phosphate ion

Tresaugues, L., Moche, M., Arrowsmith, C.H., Berglund, H., Bountra, C., Edwards, A.M., Ekblad, T., Flodin, S., Graslund, S., Karlberg, T., Nyman, T., Schuler, H., Silvander, C., Thorsell, A.G., Weigelt, J., Welin, M., Nordlund, P.

(2014) Structure 22: 744

Released	2014-04-16
Method	X-RAY DIFFRACTION 3.13 Å
Organisms	Homo sapiens
Macromolecule	INOSITOL POLYPHOSPHATE 5-PHOSPHATASE OCRL-1 (protein)
Unique Ligands	GOL, MG, PO4

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5RW2 \| pdb_00005rw2	Download File View File

INPP5D PanDDA analysis group deposition -- Crystal Structure of the phosphatase and C2 domains of SHIP1 in complex with Z2737076969

Bradshaw, W.J., Newman, J.A., von Delft, F., Arrowsmith, C.H., Edwards, A.M., Bountra, C., Gileadi, O.

(2024) Structure

Released	2020-11-11
Method	X-RAY DIFFRACTION 1.22 Å
Organisms	Homo sapiens
Macromolecule	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1 (protein)
Unique Ligands	DMS, T0V

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5RW3 \| pdb_00005rw3	Download File View File

INPP5D PanDDA analysis group deposition -- Crystal Structure of the phosphatase and C2 domains of SHIP1 in complex with Z2064898339

Bradshaw, W.J., Newman, J.A., von Delft, F., Arrowsmith, C.H., Edwards, A.M., Bountra, C., Gileadi, O.

(2024) Structure

Released	2020-11-11
Method	X-RAY DIFFRACTION 1.37 Å
Organisms	Homo sapiens
Macromolecule	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1 (protein)
Unique Ligands	DMS, WLY

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5RW4 \| pdb_00005rw4	Download File View File

INPP5D PanDDA analysis group deposition -- Crystal Structure of the phosphatase and C2 domains of SHIP1 in complex with Z19735192

Bradshaw, W.J., Newman, J.A., von Delft, F., Arrowsmith, C.H., Edwards, A.M., Bountra, C., Gileadi, O.

(2024) Structure

Released	2020-11-11
Method	X-RAY DIFFRACTION 1.31 Å
Organisms	Homo sapiens
Macromolecule	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1 (protein)
Unique Ligands	DMS, WLV

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5RW5 \| pdb_00005rw5	Download File View File

INPP5D PanDDA analysis group deposition -- Crystal Structure of the phosphatase and C2 domains of SHIP1 in complex with Z69092635

Bradshaw, W.J., Newman, J.A., von Delft, F., Arrowsmith, C.H., Edwards, A.M., Bountra, C., Gileadi, O.

(2024) Structure

Released	2020-11-11
Method	X-RAY DIFFRACTION 1.38 Å
Organisms	Homo sapiens
Macromolecule	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1 (protein)
Unique Ligands	DMS, WMV

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5RW6 \| pdb_00005rw6	Download File View File

INPP5D PanDDA analysis group deposition -- Crystal Structure of the phosphatase and C2 domains of SHIP1 in complex with Z2856434816

Bradshaw, W.J., Newman, J.A., von Delft, F., Arrowsmith, C.H., Edwards, A.M., Bountra, C., Gileadi, O.

(2024) Structure

Released	2020-11-11
Method	X-RAY DIFFRACTION 1.32 Å
Organisms	Homo sapiens
Macromolecule	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1 (protein)
Unique Ligands	DMS, WLS

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5RW7 \| pdb_00005rw7	Download File View File

INPP5D PanDDA analysis group deposition -- Crystal Structure of the phosphatase and C2 domains of SHIP1 in complex with Z86622311

Bradshaw, W.J., Newman, J.A., von Delft, F., Arrowsmith, C.H., Edwards, A.M., Bountra, C., Gileadi, O.

(2024) Structure

Released	2020-11-11
Method	X-RAY DIFFRACTION 1.23 Å
Organisms	Homo sapiens
Macromolecule	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1 (protein)
Unique Ligands	DMS, WMY

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5RW8 \| pdb_00005rw8	Download File View File

INPP5D PanDDA analysis group deposition -- Crystal Structure of the phosphatase and C2 domains of SHIP1 in complex with Z28290384

Bradshaw, W.J., Newman, J.A., von Delft, F., Arrowsmith, C.H., Edwards, A.M., Bountra, C., Gileadi, O.

(2024) Structure

Released	2020-11-11
Method	X-RAY DIFFRACTION 1.27 Å
Organisms	Homo sapiens
Macromolecule	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1 (protein)
Unique Ligands	DMS, WN1

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5RW9 \| pdb_00005rw9	Download File View File

INPP5D PanDDA analysis group deposition -- Crystal Structure of the phosphatase and C2 domains of SHIP1 in complex with Z203581214

Bradshaw, W.J., Newman, J.A., von Delft, F., Arrowsmith, C.H., Edwards, A.M., Bountra, C., Gileadi, O.

(2024) Structure

Released	2020-11-11
Method	X-RAY DIFFRACTION 1.45 Å
Organisms	Homo sapiens
Macromolecule	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1 (protein)
Unique Ligands	DMS, PO4, QKZ

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5RWA \| pdb_00005rwa	Download File View File

INPP5D PanDDA analysis group deposition -- Crystal Structure of the phosphatase and C2 domains of SHIP1 in complex with Z2856434812

Bradshaw, W.J., Newman, J.A., von Delft, F., Arrowsmith, C.H., Edwards, A.M., Bountra, C., Gileadi, O.

(2024) Structure

Released	2020-11-11
Method	X-RAY DIFFRACTION 1.29 Å
Organisms	Homo sapiens
Macromolecule	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1 (protein)
Unique Ligands	DMS, O3M

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5RWB \| pdb_00005rwb	Download File View File

INPP5D PanDDA analysis group deposition -- Crystal Structure of the phosphatase and C2 domains of SHIP1 in complex with Z2856434899

Bradshaw, W.J., Newman, J.A., von Delft, F., Arrowsmith, C.H., Edwards, A.M., Bountra, C., Gileadi, O.

(2024) Structure

Released	2020-11-11
Method	X-RAY DIFFRACTION 1.25 Å
Organisms	Homo sapiens
Macromolecule	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1 (protein)
Unique Ligands	DMS, T0Y

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5RWC \| pdb_00005rwc	Download File View File

INPP5D PanDDA analysis group deposition -- Crystal Structure of the phosphatase and C2 domains of SHIP1 in complex with Z2856434879

Bradshaw, W.J., Newman, J.A., von Delft, F., Arrowsmith, C.H., Edwards, A.M., Bountra, C., Gileadi, O.

(2024) Structure

Released	2020-11-11
Method	X-RAY DIFFRACTION 1.4 Å
Organisms	Homo sapiens
Macromolecule	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1 (protein)
Unique Ligands	2L1, DMS

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5RWD \| pdb_00005rwd	Download File View File

INPP5D PanDDA analysis group deposition -- Crystal Structure of the phosphatase and C2 domains of SHIP1 in complex with Z1675346324

Bradshaw, W.J., Newman, J.A., von Delft, F., Arrowsmith, C.H., Edwards, A.M., Bountra, C., Gileadi, O.

(2024) Structure

Released	2020-11-11
Method	X-RAY DIFFRACTION 1.29 Å
Organisms	Homo sapiens
Macromolecule	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1 (protein)
Unique Ligands	DMS, NUJ

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5RWE \| pdb_00005rwe	Download File View File

INPP5D PanDDA analysis group deposition -- Crystal Structure of the phosphatase and C2 domains of SHIP1 in complex with Z2856434865

Bradshaw, W.J., Newman, J.A., von Delft, F., Arrowsmith, C.H., Edwards, A.M., Bountra, C., Gileadi, O.

(2024) Structure

Released	2020-11-11
Method	X-RAY DIFFRACTION 1.34 Å
Organisms	Homo sapiens
Macromolecule	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1 (protein)
Unique Ligands	DMS, JJG

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5RWF \| pdb_00005rwf	Download File View File

INPP5D PanDDA analysis group deposition -- Crystal Structure of the phosphatase and C2 domains of SHIP1 in complex with Z1983897532

Bradshaw, W.J., Newman, J.A., von Delft, F., Arrowsmith, C.H., Edwards, A.M., Bountra, C., Gileadi, O.

(2024) Structure

Released	2020-11-11
Method	X-RAY DIFFRACTION 1.35 Å
Organisms	Homo sapiens
Macromolecule	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1 (protein)
Unique Ligands	DMS, WMS

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5RWG \| pdb_00005rwg	Download File View File

INPP5D PanDDA analysis group deposition -- Crystal Structure of the phosphatase and C2 domains of SHIP1 in complex with Z17497990

Bradshaw, W.J., Newman, J.A., von Delft, F., Arrowsmith, C.H., Edwards, A.M., Bountra, C., Gileadi, O.

(2024) Structure

Released	2020-11-11
Method	X-RAY DIFFRACTION 1.46 Å
Organisms	Homo sapiens
Macromolecule	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1 (protein)
Unique Ligands	DMS, S07

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5RWH \| pdb_00005rwh	Download File View File

INPP5D PanDDA analysis group deposition -- Crystal Structure of the phosphatase and C2 domains of SHIP1 in complex with Z1152242726

Bradshaw, W.J., Newman, J.A., von Delft, F., Arrowsmith, C.H., Edwards, A.M., Bountra, C., Gileadi, O.

(2024) Structure

Released	2020-11-11
Method	X-RAY DIFFRACTION 1.56 Å
Organisms	Homo sapiens
Macromolecule	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1 (protein)
Unique Ligands	DMS, VZM

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5RWI \| pdb_00005rwi	Download File View File

INPP5D PanDDA analysis group deposition -- Crystal Structure of the phosphatase and C2 domains of SHIP1 in complex with Z2856434926

Bradshaw, W.J., Newman, J.A., von Delft, F., Arrowsmith, C.H., Edwards, A.M., Bountra, C., Gileadi, O.

(2024) Structure

Released	2020-11-11
Method	X-RAY DIFFRACTION 1.29 Å
Organisms	Homo sapiens
Macromolecule	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1 (protein)
Unique Ligands	DMS, O3D

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5RWJ \| pdb_00005rwj	Download File View File

INPP5D PanDDA analysis group deposition -- Crystal Structure of the phosphatase and C2 domains of SHIP1 in complex with Z2856434824

Bradshaw, W.J., Newman, J.A., von Delft, F., Arrowsmith, C.H., Edwards, A.M., Bountra, C., Gileadi, O.

(2024) Structure

Released	2020-11-11
Method	X-RAY DIFFRACTION 1.26 Å
Organisms	Homo sapiens
Macromolecule	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1 (protein)
Unique Ligands	AXS, DMS, PO4

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5RWK \| pdb_00005rwk	Download File View File

INPP5D PanDDA analysis group deposition -- Crystal Structure of the phosphatase and C2 domains of SHIP1 in complex with Z1267881672

Bradshaw, W.J., Newman, J.A., von Delft, F., Arrowsmith, C.H., Edwards, A.M., Bountra, C., Gileadi, O.

(2024) Structure

Released	2020-11-11
Method	X-RAY DIFFRACTION 1.32 Å
Organisms	Homo sapiens
Macromolecule	Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1 (protein)
Unique Ligands	DMS, WN4

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Structure Determination Methodology

Scientific Name of Source Organism

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Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

SCOP Classification

2KIE | pdb_00002kie

2QV2 | pdb_00002qv2

2YSX | pdb_00002ysx

3QBT | pdb_00003qbt

3QIS | pdb_00003qis

4CMN | pdb_00004cmn

5RW2 | pdb_00005rw2

5RW3 | pdb_00005rw3

5RW4 | pdb_00005rw4

5RW5 | pdb_00005rw5

5RW6 | pdb_00005rw6

5RW7 | pdb_00005rw7

5RW8 | pdb_00005rw8

5RW9 | pdb_00005rw9

5RWA | pdb_00005rwa

5RWB | pdb_00005rwb

5RWC | pdb_00005rwc

5RWD | pdb_00005rwd

5RWE | pdb_00005rwe

5RWF | pdb_00005rwf

5RWG | pdb_00005rwg

5RWH | pdb_00005rwh

5RWI | pdb_00005rwi

5RWJ | pdb_00005rwj

5RWK | pdb_00005rwk