2PVA

OXIDIZED PENICILLIN V ACYLASE FROM B. SPHAERICUS


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.50 Å
  • R-Value Free: 0.245 
  • R-Value Work: 0.196 

wwPDB Validation   3D Report Full Report


This is version 1.4 of the entry. See complete history


Literature

Penicillin V acylase crystal structure reveals new Ntn-hydrolase family members.

Suresh, C.G.Pundle, A.V.SivaRaman, H.Rao, K.N.Brannigan, J.A.McVey, C.E.Verma, C.S.Dauter, Z.Dodson, E.J.Dodson, G.G.

(1999) Nat Struct Biol 6: 414-416


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
PENICILLIN V ACYLASE
A, B, C, D
345Lysinibacillus sphaericusMutation(s): 1 
EC: 3.5.1.11
UniProt
Find proteins for P12256 (Lysinibacillus sphaericus)
Explore P12256 
Go to UniProtKB:  P12256
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP12256
Sequence Annotations
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.50 Å
  • R-Value Free: 0.245 
  • R-Value Work: 0.196 
  • Space Group: P 65
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 208.4α = 90
b = 208.4β = 90
c = 96.2γ = 120
Software Package:
Software NamePurpose
MLPHAREphasing
REFMACrefinement
DENZOdata reduction
SCALEPACKdata scaling

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2000-07-26
    Type: Initial release
  • Version 1.1: 2008-04-26
    Changes: Version format compliance
  • Version 1.2: 2011-07-13
    Changes: Version format compliance
  • Version 1.3: 2018-07-11
    Changes: Data collection, Database references
  • Version 1.4: 2023-12-27
    Changes: Data collection, Database references, Derived calculations