Structure and ligand specificity of SCO4454, a TetR-family transcriptional regulator from Streptomyces coelicolor
Singer, A.U., Xu, X., Chang, C., Edwards, A.M., Joachimiak, A., Savchenko, A.To be published.
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Putative transcriptional regulator | 221 | Streptomyces coelicolor A3(2) | Mutation(s): 0  Gene Names: SCD6.32c, SCO4454 | ||
UniProt | |||||
Find proteins for Q9KZX2 (Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)) Explore Q9KZX2  Go to UniProtKB:  Q9KZX2 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q9KZX2 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 5 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
IOD Query on IOD | LA [auth B], MA [auth B], T [auth A] | IODIDE ION I XMBWDFGMSWQBCA-UHFFFAOYSA-M | |||
PEG Query on PEG | GA [auth B], R [auth A] | DI(HYDROXYETHYL)ETHER C4 H10 O3 MTHSVFCYNBDYFN-UHFFFAOYSA-N | |||
EDO Query on EDO | AA [auth B] BA [auth B] C [auth A] CA [auth B] D [auth A] | 1,2-ETHANEDIOL C2 H6 O2 LYCAIKOWRPUZTN-UHFFFAOYSA-N | |||
CL Query on CL | HA [auth B], IA [auth B], KA [auth B] | CHLORIDE ION Cl VEXZGXHMUGYJMC-UHFFFAOYSA-M | |||
NA Query on NA | JA [auth B], S [auth A] | SODIUM ION Na FKNQFGJONOIPTF-UHFFFAOYSA-N |
Modified Residues 1 Unique | |||||
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ID | Chains | Type | Formula | 2D Diagram | Parent |
MSE Query on MSE | A, B | L-PEPTIDE LINKING | C5 H11 N O2 Se | MET |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 119.103 | α = 90 |
b = 59.129 | β = 101.38 |
c = 66.895 | γ = 90 |
Software Name | Purpose |
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SBC-Collect | data collection |
HKL-3000 | phasing |
SHELXCD | phasing |
REFMAC | refinement |
HKL-3000 | data reduction |
HKL-3000 | data scaling |