Crystal structure of LpxC from Pseudomonas aeruginosa in complex with PF-5081090
Phan, J.N., Delker, S.L., Lorimer, D.D., Edwards, T.E.To be published.
Experimental Data Snapshot
Starting Model: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
UDP-3-O-acyl-N-acetylglucosamine deacetylase | 304 | Pseudomonas aeruginosa PAO1 | Mutation(s): 0  Gene Names: lpxC EC: 3.5.1.108 | ||
UniProt | |||||
Find proteins for P47205 (Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)) Explore P47205  Go to UniProtKB:  P47205 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P47205 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 4 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
8GJ Query on 8GJ | B [auth A], C [auth A] | (2R)-4-[4-(2-fluoro-4-methoxyphenyl)-2-oxopyridin-1(2H)-yl]-N-hydroxy-2-methyl-2-(methylsulfonyl)butanamide C18 H21 F N2 O6 S DNVUWHWBCMGQLU-GOSISDBHSA-N | |||
ZN Query on ZN | D [auth A], E [auth A] | ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N | |||
EDO Query on EDO | G [auth A] H [auth A] I [auth A] J [auth A] K [auth A] | 1,2-ETHANEDIOL C2 H6 O2 LYCAIKOWRPUZTN-UHFFFAOYSA-N | |||
CL Query on CL | F [auth A] | CHLORIDE ION Cl VEXZGXHMUGYJMC-UHFFFAOYSA-M |
Length ( Å ) | Angle ( ˚ ) |
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a = 35.84 | α = 111.27 |
b = 47.4 | β = 109.12 |
c = 48.15 | γ = 98.12 |
Software Name | Purpose |
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PHENIX | refinement |
XSCALE | data scaling |
Coot | model building |
PDB_EXTRACT | data extraction |
XDS | data reduction |
MOLREP | phasing |