An inhibitory segment within G-patch activators tunes Prp43-ATPase activity during ribosome assembly
Portugal Hnizda Calisto, D., Rabl, J., Panse, V.G.To be published.
Experimental Data Snapshot
Starting Model: in silico
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wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43 | 804 | Saccharomyces cerevisiae | Mutation(s): 0  Gene Names: PRP43 EC: 3.6.4.13 | ||
UniProt | |||||
Find proteins for P53131 (Saccharomyces cerevisiae (strain ATCC 204508 / S288c)) Explore P53131  Go to UniProtKB:  P53131 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P53131 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 2 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Glutathione S-transferase class-mu 26 kDa isozyme,Protein PXR1 | 368 | Schistosoma japonicum, Saccharomyces cerevisiae This entity is chimeric | Mutation(s): 0  EC: 2.5.1.18 | ||
UniProt | |||||
Find proteins for P53335 (Saccharomyces cerevisiae (strain ATCC 204508 / S288c)) Explore P53335  Go to UniProtKB:  P53335 | |||||
Find proteins for P08515 (Schistosoma japonicum) Explore P08515  Go to UniProtKB:  P08515 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Groups | P53335P08515 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 2 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
ADP (Subject of Investigation/LOI) Query on ADP | C [auth A] | ADENOSINE-5'-DIPHOSPHATE C10 H15 N5 O10 P2 XTWYTFMLZFPYCI-KQYNXXCUSA-N | |||
MG (Subject of Investigation/LOI) Query on MG | D [auth A] | MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N |
Task | Software Package | Version |
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RECONSTRUCTION | cryoSPARC | |
MODEL REFINEMENT | PHENIX |
Funding Organization | Location | Grant Number |
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Swiss National Science Foundation | Switzerland | NCCR RNA & Disease |