Structure of H. Pylori Glutamate Racemace with a crystallographic artifact
Propp, J., Spies, M.A.To be published.
Experimental Data Snapshot
Starting Model: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Glutamate racemase | 254 | Helicobacter pylori | Mutation(s): 0  Gene Names: murI EC: 5.1.1.3 | ||
UniProt | |||||
Find proteins for A0A1W0VMR6 (Helicobacter pylori) Explore A0A1W0VMR6  Go to UniProtKB:  A0A1W0VMR6 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | A0A1W0VMR6 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 3 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
WAW (Subject of Investigation/LOI) Query on WAW | D [auth A] | N-{[(3S)-2-(3-fluoropyrazin-2-yl)-1,2,3,4-tetrahydroisoquinolin-3-yl]methyl}-1H-indazole-4-carboxamide C22 H19 F N6 O GTHUQRDNWWDGLW-INIZCTEOSA-N | |||
DGL Query on DGL | C [auth A], F [auth B] | D-GLUTAMIC ACID C5 H9 N O4 WHUUTDBJXJRKMK-GSVOUGTGSA-N | |||
CL Query on CL | E [auth A], G [auth B] | CHLORIDE ION Cl VEXZGXHMUGYJMC-UHFFFAOYSA-M |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 62.317 | α = 90 |
b = 81.969 | β = 90 |
c = 113.937 | γ = 90 |
Software Name | Purpose |
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REFMAC | refinement |
PHENIX | refinement |
Aimless | data scaling |
XDS | data reduction |
PHASER | phasing |
Funding Organization | Location | Grant Number |
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National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS) | United States | 1R01GM138471-01 |