8V5L

Structure of the Varicella Zoster Virus (VZV) gI binding domain of glycoprotein E (gE) in complex with human Fab 1A2 and 1E12

External Resource: Annotation


SAbDab Antibody Annotation SAbDab Database Homepage

ChainChain ClassChain SubclassChain TypeAntigen Name(s) Provenance Source
A [auth H]Heavy ChainIGHV1 -envelope glycoprotein eSAbDab (2024-12-13)
B [auth L]Light ChainIGKV1 Kappaenvelope glycoprotein eSAbDab (2024-12-13)
D [auth B]Heavy ChainIGHV4 -envelope glycoprotein eSAbDab (2024-12-13)
E [auth C]Light ChainIGLV1 Lambdaenvelope glycoprotein eSAbDab (2024-12-13)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
C [auth A]PF20418Alphaherpesvirus glycoprotein E N-terminal (Herpes_gE_N)Alphaherpesvirus glycoprotein E N-terminalGlycoprotein E (gE) of Alphaherpesvirus forms a complex with glycoprotein I (gI) (Pfam:PF01688), functioning as an immunoglobulin G (IgG) Fc binding protein. gE is involved in virus spread but is not essential for propagation [1]. This entry represe ...Glycoprotein E (gE) of Alphaherpesvirus forms a complex with glycoprotein I (gI) (Pfam:PF01688), functioning as an immunoglobulin G (IgG) Fc binding protein. gE is involved in virus spread but is not essential for propagation [1]. This entry represents the N-terminal domain of gE, which interacts with gI [2,3].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth H]Fab 1A2 Heavy Chain---
B [auth L]Fab 1A2 Light Chain---
C [auth A]Envelope glycoprotein E- -
D [auth B]Fab 1E12 Heavy Chain---
E [auth C]Fab 1E12 Light Chain---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
C [auth A]IPR013783Immunoglobulin-like foldHomologous Superfamily
C [auth A]IPR036179Immunoglobulin-like domain superfamilyHomologous Superfamily
C [auth A]IPR046463Envelope glycoprotein E, N-terminalDomain
C [auth A]IPR003404Envelope glycoprotein E, Fc-binding domainDomain