1HB6

Structure of bovine Acyl-CoA binding protein in orthorhombic crystal form


X-RAY DIFFRACTION

Starting Model(s)

Initial Refinement Model(s)
TypeSourceAccession CodeDetails
experimental modelPDB 2ABDPDB ENTRY 2ABD

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
17.515% PEG8000, 5MMCDCL2, 10MM HEPES PH7.5, pH 7.50
Crystal Properties
Matthews coefficientSolvent content
2.447.99

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 26.05α = 90
b = 54.78β = 90
c = 65.83γ = 90
Symmetry
Space GroupP 21 21 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray293AREA DETECTORMULTIWIRE UCSD1991-08-15MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1ROTATING ANODERIGAKU

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
121994.90.04323.7647320.9
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
122.1591.20.0769.32.1

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodStarting modelResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUTPDB ENTRY 2ABD219.14639464794.40.20.20.226RANDOM26.2
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
2.83-2.90.08
RMS Deviations
KeyRefinement Restraint Deviation
c_dihedral_angle_d17.3
c_scangle_it4.63
c_scbond_it3.14
c_mcangle_it2.13
c_mcbond_it1.46
c_angle_deg0.8
c_improper_angle_d0.65
c_bond_d0.005
c_bond_d_na
c_bond_d_prot
RMS Deviations
KeyRefinement Restraint Deviation
c_dihedral_angle_d17.3
c_scangle_it4.63
c_scbond_it3.14
c_mcangle_it2.13
c_mcbond_it1.46
c_angle_deg0.8
c_improper_angle_d0.65
c_bond_d0.005
c_bond_d_na
c_bond_d_prot
c_angle_d
c_angle_d_na
c_angle_d_prot
c_angle_deg_na
c_angle_deg_prot
c_dihedral_angle_d_na
c_dihedral_angle_d_prot
c_improper_angle_d_na
c_improper_angle_d_prot
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms698
Nucleic Acid Atoms
Solvent Atoms60
Heterogen Atoms1

Software

Software
Software NamePurpose
CNSrefinement
UCSDdata reduction
UCSDdata scaling
AMoREphasing