4IXR | pdb_00004ixr


DGD: DIGALACTOSYL DIACYL GLYCEROL (DGDG)

DGD is a Ligand Of Interest in 4IXR designated by the RCSB
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Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter4IXR_DGD_C_517Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter4IXR_DGD_C_517Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter4IXR_DGD_C_517Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with same target (top 5)
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
4IXR_DGD_C_517 13% 37% 0.289 0.8721.21 1.25 6 60080%1
4IXR_DGD_c_517 12% 36% 0.303 0.8461.21 1.31 10 70094%1
4IXR_DGD_c_516 8% 37% 0.309 0.8231.24 1.25 6 70080%1
4IXR_DGD_C_518 8% 36% 0.337 0.8231.22 1.28 10 70094%1
4IXR_DGD_B_621 7% 41% 0.378 0.851.22 1.1 8 50088%1
4IXR_DGD_c_518 6% 34% 0.331 0.7671.11 1.47 6 1300100%1
4IXR_DGD_b_623 6% 40% 0.357 0.8031.2 1.14 7 50088%1
4IXR_DGD_b_602 3% 34% 0.413 0.81.23 1.37 6 80079%1
4IXR_DGD_a_413 3% 32% 0.376 0.751.19 1.52 7 120085%1
4IXR_DGD_A_411 2% 29% 0.378 0.7161.23 1.58 7 120085%1
4IXR_DGD_C_519 1% 35% 0.435 0.6611.12 1.43 7 1000100%1
4IXR_DGD_B_627 1% 33% 0.502 0.7151.22 1.43 6 90079%1
4IXR_DGD_d_409 0% 35% 0.614 0.5981.14 1.42 5 120095%1
4IXR_DGD_D_409 0% 35% 0.739 0.562 1.14 1.41 6 90095%1
5GTI_DGD_h_103 96% 52% 0.05 0.9670.89 0.96 3 30094%1
5V2C_DGD_C_516 95% 43% 0.067 0.9830.89 1.29 5 100094%1
5WS6_DGD_h_103 92% 53% 0.065 0.9680.86 0.96 3 30094%1
3WU2_DGD_C_518 92% 45% 0.063 0.9650.79 1.31 3 90094%1
7YQ7_DGD_C_518 87% 51% 0.084 0.9670.83 1.07 3 50094%1
7M78_DGD_L_207 91% 40% 0.082 0.970.93 1.4 2 1440100%1