4IXR | pdb_00004ixr


SQD: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL

SQD is a Ligand Of Interest in 4IXR designated by the RCSB


Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter4IXR_SQD_A_417Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter4IXR_SQD_A_417Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter4IXR_SQD_A_417Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with same target (top 5)
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
4IXR_SQD_A_417 5% 33% 0.373 0.7781.01 1.63 4 1200100%1
4IXR_SQD_a_401 3% 33% 0.427 0.7550.99 1.66 5 1000100%1
4IXR_SQD_A_413 3% 36% 0.393 0.7270.98 1.54 3 100094%1
4IXR_SQD_a_415 3% 35% 0.385 0.710.97 1.57 4 100094%1
4IXR_SQD_b_601 2% 33% 0.414 0.6751.02 1.62 5 90087%1
4IXR_SQD_B_626 1% 34% 0.42 0.6781.03 1.57 5 100087%1
4IXR_SQD_f_102 1% 32% 0.596 0.7511.02 1.68 4 110083%1
4IXR_SQD_D_408 0% 24% 0.664 0.7191.11 1.99 5 100080%1
4IXR_SQD_F_102 0% 31% 0.761 0.6931.04 1.67 5 100083%1
4IXR_SQD_d_408 0% 24% 0.738 0.6411.12 1.98 4 100080%1
5V2C_SQD_a_413 94% 21% 0.075 0.9761.12 2.14 4 1200100%1
5GTI_SQD_A_409 91% 29% 0.066 0.950.98 1.84 3 1300100%1
5WS6_SQD_A_411 87% 32% 0.084 0.9540.88 1.78 2 1200100%1
3WU2_SQD_A_412 78% 25% 0.089 0.9320.86 2.15 2 1700100%1
6DHE_SQD_A_412 78% 20% 0.113 0.9611.05 2.27 5 140096%1
8IRC_SQD_a_411 77% 29% 0.119 0.960.96 1.83 3 1300100%1