4TNJ | pdb_00004tnj


PL9: 2,3-DIMETHYL-5-(3,7,11,15,19,23,27,31,35-NONAMETHYL-2,6,10,14,18,22,26,30,34-HEXATRIACONTANONAENYL-2,5-CYCLOHEXADIENE-1,4-DIONE-2,3-DIMETHYL-5-SOLANESYL-1,4-BENZOQUINONE

PL9 is a Ligand Of Interest in 4TNJ designated by the RCSB


Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter4TNJ_PL9_a_409Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter4TNJ_PL9_a_409Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter4TNJ_PL9_a_409Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with same target (top 5)
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
4TNJ_PL9_a_409 3% 34% 0.383 0.7551.02 1.55 3 100082%1
4TNJ_PL9_d_406 2% 35% 0.385 0.681.02 1.53 2 1400100%1
4TNJ_PL9_D_407 2% 35% 0.388 0.6781.03 1.52 3 1300100%1
4TNJ_PL9_A_406 1% 35% 0.432 0.6940.98 1.56 4 100082%1
4TNJ_PL9_j_101 0% 35% 0.37 0.493 1 1.56 1 70064%1
4TNJ_PL9_J_101 0% 34% 0.541 0.433 1.02 1.56 1 70064%1
3WU2_PL9_d_405 98% 30% 0.047 0.9661.27 1.53 9 1300100%1
5WS6_PL9_D_405 97% 37% 0.055 0.9670.69 1.76 2 21 00100%1
5B5E_PL9_d_406 96% 33% 0.054 0.9651.05 1.59 4 1200100%1
5GTI_PL9_d_405 96% 36% 0.053 0.9620.64 1.86 2 22 00100%1
5V2C_PL9_d_407 96% 34% 0.069 0.9781.27 1.32 8 1000100%1
1VF5_PL9_Q_1305 98% 4% 0.062 0.9843.4 2.39 21 16320100%1