5E7C | pdb_00005e7c


DGD: DIGALACTOSYL DIACYL GLYCEROL (DGDG)

DGD is a Ligand Of Interest in 5E7C designated by the RCSB


Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter5E7C_DGD_C_516Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter5E7C_DGD_C_516Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter5E7C_DGD_C_516Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with same target (top 5)
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
5E7C_DGD_C_516 28% 34% 0.222 0.8881.71 0.92 16 30094%1
5E7C_DGD_H_102 27% 34% 0.229 0.8871.7 0.92 15 30094%1
5E7C_DGD_h_102 24% 33% 0.251 0.8931.69 0.97 15 40094%1
5E7C_DGD_c_517 19% 34% 0.261 0.8651.71 0.92 16 40094%1
5E7C_DGD_c_518 15% 33% 0.302 0.881.66 1 17 50094%1
5E7C_DGD_C_517 13% 33% 0.319 0.8761.65 1.02 17 50094%1
5E7C_DGD_C_518 9% 32% 0.353 0.8531.68 1.03 16 50094%1
5E7C_DGD_c_519 3% 32% 0.474 0.8251.67 1.06 16 40094%1
5E7C_DGD_D_406 2% 29% 0.443 0.6911.73 1.13 14 70094%1
5E7C_DGD_d_405 1% 32% 0.484 0.5841.71 1.03 15 60094%1
5GTI_DGD_h_103 96% 52% 0.05 0.9670.89 0.96 3 30094%1
5V2C_DGD_C_516 95% 43% 0.067 0.9830.89 1.29 5 100094%1
5WS6_DGD_h_103 92% 53% 0.065 0.9680.86 0.96 3 30094%1
3WU2_DGD_C_518 92% 45% 0.063 0.9650.79 1.31 3 90094%1
5B66_DGD_C_516 91% 46% 0.067 0.9650.89 1.2 2 70094%1
7M78_DGD_L_207 91% 40% 0.082 0.970.93 1.4 2 1440100%1