DGD: DIGALACTOSYL DIACYL GLYCEROL (DGDG)
DGD is a Ligand Of Interest in 5KAI designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
5KAI_DGD_C_519 | 48% | 41% | 0.172 | 0.925 | 0.88 | 1.41 | 1 | 9 | 0 | 0 | 94% | 0.9394 |
5KAI_DGD_C_517 | 41% | 42% | 0.195 | 0.921 | 0.84 | 1.41 | 2 | 9 | 0 | 0 | 94% | 0.9394 |
5KAI_DGD_c_516 | 41% | 41% | 0.198 | 0.924 | 0.87 | 1.41 | 2 | 9 | 0 | 0 | 94% | 0.9394 |
5KAI_DGD_c_518 | 40% | 41% | 0.192 | 0.916 | 0.86 | 1.41 | 2 | 11 | 0 | 0 | 94% | 0.9394 |
5KAI_DGD_C_518 | 40% | 39% | 0.188 | 0.911 | 0.92 | 1.44 | 4 | 9 | 0 | 0 | 94% | 0.9394 |
5KAI_DGD_H_103 | 36% | 43% | 0.206 | 0.909 | 0.87 | 1.34 | 1 | 7 | 0 | 0 | 94% | 0.9394 |
5KAI_DGD_c_517 | 29% | 39% | 0.218 | 0.885 | 0.95 | 1.41 | 4 | 9 | 0 | 0 | 94% | 0.9394 |
5KAI_DGD_h_102 | 28% | 43% | 0.229 | 0.895 | 0.89 | 1.29 | - | 7 | 0 | 0 | 94% | 0.9394 |
5GTI_DGD_h_103 | 96% | 52% | 0.05 | 0.967 | 0.89 | 0.96 | 3 | 3 | 0 | 0 | 94% | 0.9394 |
5V2C_DGD_C_516 | 95% | 43% | 0.067 | 0.983 | 0.89 | 1.29 | 5 | 10 | 0 | 0 | 94% | 0.9394 |
7YQ7_DGD_C_518 | 87% | 51% | 0.084 | 0.967 | 0.83 | 1.07 | 3 | 5 | 0 | 0 | 94% | 0.9394 |
8IR5_DGD_C_515 | 86% | 47% | 0.092 | 0.97 | 0.81 | 1.21 | 2 | 8 | 0 | 0 | 94% | 0.9394 |
8IRC_DGD_C_517 | 85% | 47% | 0.096 | 0.973 | 0.83 | 1.2 | 2 | 8 | 0 | 0 | 94% | 0.9394 |