SQD: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL
SQD is a Ligand Of Interest in 5KAI designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
5KAI_SQD_A_612 | 39% | 33% | 0.206 | 0.918 | 0.96 | 1.67 | 5 | 12 | 0 | 0 | 96% | 0.963 |
5KAI_SQD_a_714 | 38% | 34% | 0.217 | 0.918 | 0.95 | 1.63 | 5 | 12 | 0 | 0 | 100% | 1 |
5KAI_SQD_B_626 | 24% | 32% | 0.25 | 0.882 | 0.95 | 1.71 | 5 | 10 | 0 | 0 | 100% | 1 |
5KAI_SQD_b_601 | 19% | 32% | 0.238 | 0.831 | 0.94 | 1.72 | 3 | 10 | 0 | 0 | 100% | 1 |
5KAI_SQD_A_614 | 16% | 46% | 0.223 | 0.837 | 0.88 | 1.2 | 2 | 3 | 0 | 0 | 74% | 0.7407 |
5KAI_SQD_D_410 | 14% | 32% | 0.291 | 0.881 | 1.06 | 1.63 | 5 | 10 | 0 | 0 | 80% | 0.7963 |
5KAI_SQD_f_102 | 11% | 32% | 0.301 | 0.866 | 1.09 | 1.6 | 5 | 9 | 0 | 0 | 76% | 0.7593 |
5KAI_SQD_B_623 | 6% | 29% | 0.269 | 0.736 | 1.01 | 1.82 | 3 | 12 | 0 | 0 | 87% | 0.8704 |
5KAI_SQD_I_102 | 1% | 46% | 0.485 | 0.648 | 0.86 | 1.22 | 2 | 2 | 0 | 0 | 74% | 0.7407 |
5V2C_SQD_a_413 | 94% | 21% | 0.075 | 0.976 | 1.12 | 2.14 | 4 | 12 | 0 | 0 | 100% | 1 |
5GTI_SQD_A_409 | 91% | 29% | 0.066 | 0.95 | 0.98 | 1.84 | 3 | 13 | 0 | 0 | 100% | 1 |
6DHE_SQD_A_412 | 78% | 20% | 0.113 | 0.961 | 1.05 | 2.27 | 5 | 14 | 0 | 0 | 96% | 0.963 |
8IRC_SQD_a_411 | 77% | 29% | 0.119 | 0.96 | 0.96 | 1.83 | 3 | 13 | 0 | 0 | 100% | 1 |
8IR5_SQD_a_411 | 76% | 31% | 0.123 | 0.958 | 0.95 | 1.77 | 3 | 13 | 0 | 0 | 100% | 1 |